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Microbiome. 2024 Jan 12;12(1):9. doi: 10.1186/s40168-023-01719-3 Q112.72025

Biogeographic survey of soil bacterial communities across Antarctica

南极土壤细菌群落的生物地理调查 翻译改进

Gilda Varliero  1  2, Pedro H Lebre  1, Byron Adams  3  4, Steven L Chown  5, Peter Convey  6  7  8, Paul G Dennis  9, Dandan Fan  10, Belinda Ferrari  11, Beat Frey  2, Ian D Hogg  12  13, David W Hopkins  14, Weidong Kong  10, Thulani Makhalanyane  15, Gwynneth Matcher  16, Kevin K Newsham  6, Mark I Stevens  17  18, Katherine V Weigh  9, Don A Cowan  19

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作者单位

  • 1 Department of Biochemistry, Genetics and Microbiology, Centre for Microbial Ecology and Genomics, University of Pretoria, Pretoria, 0002, South Africa.
  • 2 Rhizosphere Processes Group, Swiss Federal Research Institute WSL, 8903, Birmensdorf, Switzerland.
  • 3 Department of Biology, Brigham Young University, Provo, UT, 84602, USA.
  • 4 Monte L. Bean Life Science Museum, Brigham Young University, Provo, UT, 84602, USA.
  • 5 Securing Antarctica's Environmental Future, School of Biological Sciences, Monash University, Clayton, VA, 3800, Australia.
  • 6 British Antarctic Survey, Natural Environment Research Council, High Cross, Madingley Road, Cambridge, CB3 0ET, UK.
  • 7 Department of Zoology, University of Johannesburg, PO Box 524, Auckland Park, 2006, South Africa.
  • 8 Biodiversity of Antarctic and Sub-Antarctic Ecosystems (BASE), Santiago, Chile.
  • 9 School of the Environment, The University of Queensland, Brisbane, QLD, 4072, Australia.
  • 10 State Key Laboratory of Tibetan Plateau Earth System, Environment and Resources (TPESER), Institute of Tibetan Plateau Research, Chinese Academy of Sciences, Beijing, 100101, China.
  • 11 School of Biotechnology and Biomolecular Sciences, University of NSW, Sydney, NSW, 2052, Australia.
  • 12 School of Science, University of Waikato, Hamilton, New Zealand.
  • 13 Canadian High Arctic Research Station, Polar Knowledge Canada, Cambridge Bay, NU, Canada.
  • 14 SRUC - Scotland's Rural College, West Mains Road, Edinburgh, EH9 3JG, Scotland, UK.
  • 15 Department of Biochemistry, Genetics and Microbiology, University of Pretoria, Pretoria, 0002, South Africa.
  • 16 Department of Biochemistry and Microbiology, Rhodes University, Makhanda, South Africa.
  • 17 Securing Antarctica's Environmental Future, Earth and Biological Sciences, South Australian Museum, Adelaide, SA, 5000, Australia.
  • 18 School of Biological Sciences, University of Adelaide, Adelaide, SA, 5005, Australia.
  • 19 Department of Biochemistry, Genetics and Microbiology, Centre for Microbial Ecology and Genomics, University of Pretoria, Pretoria, 0002, South Africa. don.cowan@up.ac.za.
  • DOI: 10.1186/s40168-023-01719-3 PMID: 38212738

    摘要 Ai翻译

    Background: Antarctica and its unique biodiversity are increasingly at risk from the effects of global climate change and other human influences. A significant recent element underpinning strategies for Antarctic conservation has been the development of a system of Antarctic Conservation Biogeographic Regions (ACBRs). The datasets supporting this classification are, however, dominated by eukaryotic taxa, with contributions from the bacterial domain restricted to Actinomycetota and Cyanobacteriota. Nevertheless, the ice-free areas of the Antarctic continent and the sub-Antarctic islands are dominated in terms of diversity by bacteria. Our study aims to generate a comprehensive phylogenetic dataset of Antarctic bacteria with wide geographical coverage on the continent and sub-Antarctic islands, to investigate whether bacterial diversity and distribution is reflected in the current ACBRs.

    Results: Soil bacterial diversity and community composition did not fully conform with the ACBR classification. Although 19% of the variability was explained by this classification, the largest differences in bacterial community composition were between the broader continental and maritime Antarctic regions, where a degree of structural overlapping within continental and maritime bacterial communities was apparent, not fully reflecting the division into separate ACBRs. Strong divergence in soil bacterial community composition was also apparent between the Antarctic/sub-Antarctic islands and the Antarctic mainland. Bacterial communities were partially shaped by bioclimatic conditions, with 28% of dominant genera showing habitat preferences connected to at least one of the bioclimatic variables included in our analyses. These genera were also reported as indicator taxa for the ACBRs.

    Conclusions: Overall, our data indicate that the current ACBR subdivision of the Antarctic continent does not fully reflect bacterial distribution and diversity in Antarctica. We observed considerable overlap in the structure of soil bacterial communities within the maritime Antarctic region and within the continental Antarctic region. Our results also suggest that bacterial communities might be impacted by regional climatic and other environmental changes. The dataset developed in this study provides a comprehensive baseline that will provide a valuable tool for biodiversity conservation efforts on the continent. Further studies are clearly required, and we emphasize the need for more extensive campaigns to systematically sample and characterize Antarctic and sub-Antarctic soil microbial communities. Video Abstract.

    Keywords: Antarctic Conservation Biogeographic Regions (ACBRs); Antarctic soil microbiome; Bioclimatic variables; Biogeography; Microbial diversity; Regionalization; Soils.

    Keywords:soil bacterial communities; Antarctica

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    期刊名:Microbiome

    缩写:MICROBIOME

    ISSN:2049-2618

    e-ISSN:2049-2618

    IF/分区:12.7/Q1

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