MBPD: A multiple bacterial pathogen detection pipeline for One Health practices [0.03%]
面向同一健康实践的多重细菌病原体检测管道MBPD
Xinrun Yang,Gaofei Jiang,Yaozhong Zhang et al.
Xinrun Yang et al.
Bacterial pathogens are one of the major threats to biosafety and environmental health, and advanced assessment is a prerequisite to combating bacterial pathogens. Currently, 16S rRNA gene sequencing is efficient in the open-view detection ...
Nan Zhang,Shruthi Kandalai,Xiaozhuang Zhou et al.
Nan Zhang et al.
Rather than a "short-term tenant," the tumor microbiome has been shown to play a vital role as a "permanent resident," affecting carcinogenesis, cancer development, metastasis, and cancer therapies. As the tumor microbiome has great potenti...
Review
iMeta. 2023 Jan 9;2(1):e73. DOI:10.1002/imt2.73 2023
New insights into the mechanisms of high-fat diet mediated gut microbiota in chronic diseases [0.03%]
高脂饮食介导的肠道菌群在慢性疾病中的作用机制新见解
Jiali Chen,Yuhang Xiao,Dongmei Li et al.
Jiali Chen et al.
High-fat diet (HFD) has been recognized as a primary factor in the risk of chronic disease. Obesity, diabetes, gastrointestinal diseases, neurodegenerative diseases, and cardiovascular diseases have long been known as chronic diseases with ...
Review
iMeta. 2023 Jan 5;2(1):e69. DOI:10.1002/imt2.69 2023
OmicStudio: A composable bioinformatics cloud platform with real-time feedback that can generate high-quality graphs for publication [0.03%]
OmicStudio：一个可组合的生物信息学云平台，具有实时反馈功能，可以生成高质量的出版物级图表
Fengye Lyu,Feiran Han,Changli Ge et al.
Fengye Lyu et al.
OmicStudio focuses on speed, quality together with flexibility. Generally, OmicStudio can not only meet the users' demand of ordinary bioinformatics data analysis, statistics, and visualization, but also provides them freedom of data mining...
Deciphering factors driving soil microbial life-history strategies in restored grasslands [0.03%]
解析恢复草地土壤微生物生活史策略的影响因素
Yang Yang,Yanxing Dou,Baorong Wang et al.
Yang Yang et al.
In macroecology, the concept of r- and K-strategy has been widely applied, yet, there have been limited studies on microbial life-history strategies in temperate grasslands using multiple sequencing approaches. Total phospholipid fatty acid...
Destabilized microbial networks with distinct performances of abundant and rare biospheres in maintaining networks under increasing salinity stress [0.03%]
在不断增加的盐分胁迫下，丰富和稀有微生物群落对维持网络性能的影响不同导致微生物网络不稳定
Changchao Li,Ling Jin,Chao Zhang et al.
Changchao Li et al.
Global changes such as seawater intrusion and freshwater resource salinization increase environmental stress imposed on the aquatic microbiome. A strong predictive understanding of the responses of the aquatic microbiome to environmental st...
Soil labile organic carbon fractions mediate microbial community assembly processes during long-term vegetation succession in a semiarid region [0.03%]
长期植被演替过程中土壤易降解有机碳介导半干旱区微生物组装过程
Jingwei Shi,Lin Yang,Yang Liao et al.
Jingwei Shi et al.
Conceptual diagram for the labile organic carbon (OC) fractions mediating microbial assembly processes during long-term vegetation succession. © 2023 Th...
Correction to "MetOrigin: Discriminating the origins of microbial metabolites for integrative analysis of the gut microbiome and metabolome" [0.03%]
对“MetOrigin：用于综合分析肠道微生物组和代谢组的微生物代谢物溯源”一文的更正
[This corrects the article DOI: 10.1002/imt2.10.]. © 2023 The Authors. iMeta published by John Wiley & Sons Australia, Ltd on behalf of iMeta Science.
Published Erratum
iMeta. 2023 Nov 6;2(4):e149. DOI:10.1002/imt2.149 2023
Correction to "MetaTrass: A high-quality metagenome assembler of the human gut microbiome by cobarcoding sequencing reads" [0.03%]
有关“MetaTrass：通过联合条形码测序读段高质量的人类肠道微生物组重叠群组装程序”的更正通知
[This corrects the article DOI: 10.1002/imt2.46.]. © 2023 The Authors. iMeta published by John Wiley & Sons Australia, Ltd on behalf of iMeta Science.
Published Erratum
iMeta. 2023 Nov 6;2(4):e150. DOI:10.1002/imt2.150 2023
TOmicsVis: An all-in-one transcriptomic analysis and visualization R package with Shinyapp interface [0.03%]
TomicsVis：一个具有Shinyapp界面的转录组分析和可视化R包
Ben-Ben Miao,Wei Dong,Zhao-Fang Han et al.
Ben-Ben Miao et al.
Transcriptomic analysis has been widely used in comparative experiments to uncover biological mechanisms in various species. However, a simple tool is still lacking to optimize and integrate the features from multiple R packages. In this st...