Interpretable multi-omics machine learning reveals drought-driven shifts in plant-microbe interactions [0.03%]
Hayato Yoshioka,Pavla Debeljak,Soizic Prado et al.
Hayato Yoshioka et al.
Background: Plant-microbe interactions in the rhizosphere are central to plant growth, nutrient acquisition, and stress resilience. Although multi-omics approaches enable comprehensive profiling of different biological la...
Functional redundancy and stability support the resilience of the Evernia prunastri holobiont under urbanization [0.03%]
Panji Cahya Mawarda,Arjen Speksnijder,Daan Krijger et al.
Panji Cahya Mawarda et al.
Background: Lichens are now recognized as holobionts comprising a mycobiont, photobiont, and diverse microbiomes, yet the functional roles of these additional microbial partners remain poorly characterized, especially und...
The composition and function succession of lignocellulose-degrading microbial consortia drives in situ decomposition of rice straw in paddy fields [0.03%]
Binhan Zhao,Wenjun Dong,Yang Yu et al.
Binhan Zhao et al.
Background: Straw incorporation into soil can increase soil organic matter content and improve soil structure. However, the in situ decomposition mechanisms of straw in field remain unclear. ...
Pablo Bruna,Patricio Javier Barra,Matías García et al.
Pablo Bruna et al.
Background: Phosphorus (P) is a fundamental macronutrient for plant and microbial growth, but its availability in soils is often constrained by strong interactions with minerals and organic matter. While the role of bacte...
Claire E Mullin,Stilianos Louca
Claire E Mullin
Sample preservation remains a challenge in microbiome surveys, particularly in remote areas. Drying samples eliminates the need for cold chains and preservatives, but sophisticated desiccation tools such as lyophilization are impractical in...
Microbial functional traits in the hyperaccumulating Noccaea praecox rhizobiome are metal-dependent and host-driven [0.03%]
Valentina Bočaj,Paula Pongrac,Matevž Likar
Valentina Bočaj
Background: Noccaea praecox is a zinc (Zn), cadmium (Cd), and lead (Pb) hyperaccumulating plant native to the Italian peninsula and Western Balkans, where it occurs naturally in both metalliferous and non-metalliferous so...
Generalist phyllosphere taxa dominate microbial communities on macrophytes across a natural salinity gradient [0.03%]
Daniel P R Herlemann,David J Riedinger,Victor Fenández-Juárez et al.
Daniel P R Herlemann et al.
Background: Shallow coastal habitats are characterized by diverse macrophytes and often feature steep abiotic gradients, including salinity variations, which can shape the leaf- surface epi-microbiome (phyllosphere). To e...
Valeria Castaldi,Wisnu Adi Wicaksono,Martina Chiara Criscuolo et al.
Valeria Castaldi et al.
Background: Plant-derived peptides can act as resistance inducers and represent promising tools for sustainable crop protection. Despite growing interest and application, their broader effects on plant-associated microbio...
Phytoplankton community dynamics and their role in naphthenic acid transformation within a constructed wetland system treating oil sands process-affected water [0.03%]
Dilini M Atugala,Lisa M Gieg
Dilini M Atugala
Phenotypic resistance profiles and resistome variations between endophytic and epiphytic bacteria in apple fruits [0.03%]
苹果果实内生和附生细菌的表型耐药谱系和耐药基因组差异分析
Denis Kiplimo,Ana María Sánchez,Dinesh Kumar Ramakrishnan et al.
Denis Kiplimo et al.
Background: In recent years, there has been increasing concerns about antibiotic resistance. Although studies have investigated resistance in food-associated bacteria, fresh produce microbes remain underexplored as potent...