N Moshiri
N Moshiri
Phylogenetic trees are essential to evolutionary biology, and numerous methods exist that attempt to extract phylogenetic information applicable to a wide range of disciplines, such as epidemiology and metagenomics. Currently, the three mai...
Rachel A Aronow,Shaya Akbarinejad,Trang Le et al.
Rachel A Aronow et al.
There are many experimental methods for characterizing immune profiles of tumors, such as flow and mass cytometry. However, these approaches are time and resource intensive. Thus, several "digital cytometry" methods have been developed to e...
Open community platform for hearing aid algorithm research: open Master Hearing Aid (openMHA) [0.03%]
开源的助听器算法研究平台：开放性大师助听器（openMHA）
Hendrik Kayser,Tobias Herzke,Paul Maanen et al.
Hendrik Kayser et al.
open Master Hearing Aid (openMHA) was developed and provided to the hearing aid research community as an open-source software platform with the aim to support sustainable and reproducible research towards improvement and new types of assist...
iScore: An MPI supported software for ranking protein-protein docking models based on a random walk graph kernel and support vector machines [0.03%]
基于随机游走图核和支点机的蛋白质-蛋白质对接模型排序软件iScore及MPI支持版本
Nicolas Renaud,Yong Jung,Vasant Honavar et al.
Nicolas Renaud et al.
Computational docking is a promising tool to model three-dimensional (3D) structures of protein-protein complexes, which provides fundamental insights of protein functions in the cellular life. Singling out near-native models from the huge ...
pySuStaIn: a Python implementation of the Subtype and Stage Inference algorithm [0.03%]
pySuStaIn：Subtype和Stage推理算法的Python实现
Leon M Aksman,Peter A Wijeratne,Neil P Oxtoby et al.
Leon M Aksman et al.
Progressive disorders are highly heterogeneous. Symptom-based clinical classification of these disorders may not reflect the underlying pathobiology. Data-driven subtyping and staging of patients has the potential to disentangle the complex...
Covira: A COVID-19 risk assessment, visualization and communication tool [0.03%]
Covira：一个COVID-19风险评估、可视化和交流工具
Bhoj Raj Ghimire,Rishi Ram Parajuli,Bipin Khatiwada et al.
Bhoj Raj Ghimire et al.
Assessing the possibility of Coronavirus infection and its risk on an individual's life, estimating the spatial transmission risk based on the dynamic condition of a particular place into consideration, and communicating the same to the pub...
CycFlowDec: A Python module for decomposing flow networks using simple cycles [0.03%]
CycFlowDec：一个使用简单循环分解流网络的Python模块
Austen Bernardi,Jessica M J Swanson
Austen Bernardi
New algorithms for determining the expected flow through simple cycles in a closed network are presented. Current network analysis software do not implement algorithms for expected cyclic flow decomposition, despite its potential value. Dec...
FM-Track: A fiducial marker tracking software for studying cell mechanics in a three-dimensional environment [0.03%]
基于标识物的三维细胞行为观测软件FM-TRACK
Emma Lejeune,Alex Khang,Jacob Sansom et al.
Emma Lejeune et al.
Tracking the deformation of fiducial markers in the vicinity of living cells embedded in compliant synthetic or biological gels is a powerful means to study cell mechanics and mechanobiology in three-dimensional environments. However, curre...
CemrgApp: An interactive medical imaging application with image processing, computer vision, and machine learning toolkits for cardiovascular research [0.03%]
一种交互式医学影像应用——集图像处理、计算机视觉和机器学习工具包于一体的心血管研究应用(CemrgApp)
Orod Razeghi,José Alonso Solís-Lemus,Angela W C Lee et al.
Orod Razeghi et al.
Personalised medicine is based on the principle that each body is unique and will respond to therapies differently. In cardiology, characterising patient specific cardiovascular properties would help in personalising care. One promising app...
Deep learning application engine (DLAE): Development and integration of deep learning algorithms in medical imaging [0.03%]
深度学习应用引擎(DLAE)：医学影像中深度学习算法的开发与整合
Jeremiah W Sanders,Justin R Fletcher,Steven J Frank et al.
Jeremiah W Sanders et al.
Herein we introduce a deep learning (DL) application engine (DLAE) system concept, present potential uses of it, and describe pathways for its integration in clinical workflows. An open-source software application was developed to provide a...