pySuStaIn: a Python implementation of the Subtype and Stage Inference algorithm [0.03%]
pySuStaIn：Subtype和Stage推理算法的Python实现
Leon M Aksman,Peter A Wijeratne,Neil P Oxtoby et al.
Leon M Aksman et al.
Progressive disorders are highly heterogeneous. Symptom-based clinical classification of these disorders may not reflect the underlying pathobiology. Data-driven subtyping and staging of patients has the potential to disentangle the complex...
Covira: A COVID-19 risk assessment, visualization and communication tool [0.03%]
Covira：一个COVID-19风险评估、可视化和交流工具
Bhoj Raj Ghimire,Rishi Ram Parajuli,Bipin Khatiwada et al.
Bhoj Raj Ghimire et al.
Assessing the possibility of Coronavirus infection and its risk on an individual's life, estimating the spatial transmission risk based on the dynamic condition of a particular place into consideration, and communicating the same to the pub...
CycFlowDec: A Python module for decomposing flow networks using simple cycles [0.03%]
CycFlowDec：一个使用简单循环分解流网络的Python模块
Austen Bernardi,Jessica M J Swanson
Austen Bernardi
New algorithms for determining the expected flow through simple cycles in a closed network are presented. Current network analysis software do not implement algorithms for expected cyclic flow decomposition, despite its potential value. Dec...
FM-Track: A fiducial marker tracking software for studying cell mechanics in a three-dimensional environment [0.03%]
基于标识物的三维细胞行为观测软件FM-TRACK
Emma Lejeune,Alex Khang,Jacob Sansom et al.
Emma Lejeune et al.
Tracking the deformation of fiducial markers in the vicinity of living cells embedded in compliant synthetic or biological gels is a powerful means to study cell mechanics and mechanobiology in three-dimensional environments. However, curre...
CemrgApp: An interactive medical imaging application with image processing, computer vision, and machine learning toolkits for cardiovascular research [0.03%]
一种交互式医学影像应用——集图像处理、计算机视觉和机器学习工具包于一体的心血管研究应用(CemrgApp)
Orod Razeghi,José Alonso Solís-Lemus,Angela W C Lee et al.
Orod Razeghi et al.
Personalised medicine is based on the principle that each body is unique and will respond to therapies differently. In cardiology, characterising patient specific cardiovascular properties would help in personalising care. One promising app...
Deep learning application engine (DLAE): Development and integration of deep learning algorithms in medical imaging [0.03%]
深度学习应用引擎(DLAE)：医学影像中深度学习算法的开发与整合
Jeremiah W Sanders,Justin R Fletcher,Steven J Frank et al.
Jeremiah W Sanders et al.
Herein we introduce a deep learning (DL) application engine (DLAE) system concept, present potential uses of it, and describe pathways for its integration in clinical workflows. An open-source software application was developed to provide a...
Zahrate El Oula Frihi,Julian Barreiro-Gomez,Salah Eddine Choutri et al.
Zahrate El Oula Frihi et al.
In this paper, we present an age-and-migration-dependent Markov-chain-based model for the propagation of the COVID-19, together with a user-friendly MatLab-based toolbox. Furthermore, we present examples to simulate the propagation of the v...
Graphical interface for automated management of motion artifact within fMRI acquisitions: INFOBAR [0.03%]
基于图形的界面自动化管理功能磁共振成像采集过程中的运动伪影：INFOBAR
Manish Anand,Jed A Diekfuss,Alexis B Slutsky-Ganesh et al.
Manish Anand et al.
Independent Component Analysis-based Automatic Removal of Motion Artifacts (ICA-AROMA; Pruim et al., 2015) is a robust approach to remove brain activity related to head motion within functional magnetic resonance imaging (fMRI) datasets. Ho...
pksensi: An R package to apply global sensitivity analysis in physiologically based kinetic modeling [0.03%]
PKSensi：一个应用于生理基元动力学模型的全局敏感性分析R包
Nan-Hung Hsieh,Brad Reisfeld,Weihsueh A Chiu
Nan-Hung Hsieh
Sensitivity analysis (SA) is an essential tool for modelers to understand the influence of model parameters on model outputs. It is also increasingly used in developing and assessing physiologically based kinetic (PBK) models. For instance,...
CameraTransform: A Python package for perspective corrections and image mapping [0.03%]
CameraTransform：一个用于透视校正和图像映射的Python包
Richard C Gerum,Sebastian Richter,Alexander Winterl et al.
Richard C Gerum et al.
Camera images and video recordings are simple and non-invasive tools to investigate animals in their natural habitat. Quantitative evaluations, however, often require an exact reconstruction of object positions, sizes, and distances in the ...