Orchid fruit and root movement analyzed using 2D photographs and a bioinformatics pipeline for processing sequential 3D scans [0.03%]
使用二维照片和生物信息学管道处理顺序三维扫描分析兰花的果和根的运动
Dewi Pramanik,Lotta Vaskimo,K Joost Batenburg et al.
Dewi Pramanik et al.
Premise: Most studies of the movement of orchid fruits and roots during plant development have focused on morphological observations; however, further genetic analysis is required to understand the molecular mechanisms un...
Humans in the loop: Community science and machine learning synergies for overcoming herbarium digitization bottlenecks [0.03%]
人类参与循环：社区科学和机器学习协同解决标本馆数字化瓶颈问题
Robert Guralnick,Raphael LaFrance,Michael Denslow et al.
Robert Guralnick et al.
Premise: Among the slowest steps in the digitization of natural history collections is converting imaged labels into digital text. We present here a working solution to overcome this long-recognized efficiency bottleneck ...
Mason C McNair,Sebastian C Cocioba,Peter Pietrzyk et al.
Mason C McNair et al.
Premise: Low-cost, repairable lab equipment is rare within the biological sciences. By lowering the costs of entry using 3D printing and open-source hardware, our goal is to empower both amateur and professional scientist...
CuticleTrace: A toolkit for capturing cell outlines from leaf cuticle with implications for paleoecology and paleoclimatology [0.03%]
CuticleTrace：用于从叶表皮捕获细胞轮廓的工具包，对古生态学和古气候学的影响
Benjamin A Lloyd,Richard S Barclay,Regan E Dunn et al.
Benjamin A Lloyd et al.
Premise: Leaf epidermal cell morphology is closely tied to the evolutionary history of plants and their growth environments and is therefore of interest to many plant biologists. However, cell measurement can be time cons...
An updated and extended version of the Melastomataceae probe set for target capture [0.03%]
靶向捕获的Melastomataceae探针集的更新和扩展版本
Léo-Paul M J Dagallier,Fabián A Michelangeli
Léo-Paul M J Dagallier
Premise: A probe set was previously designed to target 384 nuclear loci in the Melastomataceae family; however, when trying to use it, we encountered several practical and conceptual problems, such as the presence of sequ...
Compositae-ParaLoss-1272: A complementary sunflower-specific probe set reduces paralogs in phylogenomic analyses of complex systems [0.03%]
Compositae-ParaLoss-1272：一组互补的向日葵特异性探针组可降低复杂系统中系统发生基因组分析中的同源基因数量
Erika R Moore-Pollard,Daniel S Jones,Jennifer R Mandel
Erika R Moore-Pollard
Premise: A family-specific probe set for sunflowers, Compositae-1061, enables family-wide phylogenomic studies and investigations at lower taxonomic levels, but may lack resolution at genus to species levels, especially i...
FloraTraiter: Automated parsing of traits from descriptive biodiversity literature [0.03%]
FloraTraiter：从描述性生物多样性文献中自动解析特征
Ryan A Folk,Robert P Guralnick,Raphael T LaFrance
Ryan A Folk
Premise: Plant trait data are essential for quantifying biodiversity and function across Earth, but these data are challenging to acquire for large studies. Diverse strategies are needed, including the liberation of herit...
A target enrichment probe set for resolving phylogenetic relationships in the coffee family, Rubiaceae [0.03%]
咖啡属植物分类关系的靶向富集探针集合
Laymon D Ball,Ana M Bedoya,Charlotte M Taylor et al.
Laymon D Ball et al.
Premise: Rubiaceae is among the most species-rich plant families, as well as one of the most morphologically and geographically diverse. Currently available phylogenies have mostly relied on few genomic and plastid loci, ...
Candidate pathway association and genome-wide association approaches reveal alternative genetic architectures of carotenoid content in cultivated sunflower (Helianthus annuus) [0.03%]
候选途径关联和全基因组关联分析揭示了栽培向日葵中类胡萝卜素含量的遗传结构
Jordan A Dowell,Chase Mason
Jordan A Dowell
Premise: The explosion of available genomic data poses significant opportunities and challenges for genome-wide association studies. Current approaches via linear mixed models (LMM) are straightforward but prevent flexibl...
LoCoLotive: In silico mining for low-copy nuclear loci based on target capture probe sets and arbitrary reference genomes [0.03%]
基于目标捕获探针组和任意参考基因组的低拷贝核位点的“网络开采”（in silico mining）软件 LoCoLocite 的研发
Ulrich Lautenschlager,Agnes Scheunert
Ulrich Lautenschlager
Premise: Universal target enrichment probe kits are used to circumvent the individual identification of loci suitable for phylogenetic studies in a given taxon. Under certain circumstances, however, target capture can be ...