Genomic insights into antibiotic-resistance and virulence genes of Enterococcus faecium strains from the gut of Apis mellifera [0.03%]
肠道内Apis mellifera中Enterococcus faecium菌株的基因组视角下的抗生素抗性与毒力基因研究
Heba A H Zaghloul,Nancy M El Halfawy
Heba A H Zaghloul
Enterococcus faecium is a lactic acid bacterium that confers beneficial health effects in humans. However, lately, a number of E. faecium strains have been linked to the spread of nosocomial infections in the hospital environment. Therefore...
Evaluation of tangential flow filtration coupled to long-read sequencing for ostreid herpesvirus type 1 genome assembly [0.03%]
切向流过滤结合长读段测序在1型牡蛎疱疹病毒基因组装中的评价
Aurélie Dotto-Maurel,Camille Pelletier,Benjamin Morga et al.
Aurélie Dotto-Maurel et al.
Whole-genome sequencing is widely used to better understand the transmission dynamics, the evolution and the emergence of new variants of viral pathogens. This can bring crucial information to stakeholders for disease management. Unfortunat...
Shared properties of gene transfer agent and core genes revealed by comparative genomics of Alphaproteobacteria [0.03%]
通过Alphaproteobacteria的比较基因组学揭示的基因转移剂和核心基因的共有属性
Sonja Koppenhöfer,Jürgen Tomasch,Andrew S Lang
Sonja Koppenhöfer
Gene transfer agents (GTAs) are phage-like particles that transfer pieces of cellular genomic DNA to other cells. Homologues of the Rhodobacter capsulatus GTA (RcGTA) structural genes are widely distributed in the Alphaproteobacteria and pa...
Comparison of the genetic basis of biofilm formation between Salmonella Typhimurium and Escherichia coli [0.03%]
鼠伤寒沙门氏菌与大肠杆菌生物被膜形成的遗传基础的比较分析
Emma R Holden,Muhammad Yasir,A Keith Turner et al.
Emma R Holden et al.
Most bacteria can form biofilms, which typically have a life cycle from cells initially attaching to a surface before aggregation and growth produces biomass and an extracellular matrix before finally cells disperse. To maximize fitness at ...
Genetic diversity and variation in antimicrobial-resistance determinants of non-serotype 2 Streptococcus suis isolates from healthy pigs [0.03%]
健康猪中非型2株的基因多样性及抗微生物耐药决定因子变异研究
Nattinee Kittiwan,Jessica K Calland,Evangelos Mourkas et al.
Nattinee Kittiwan et al.
Streptococcus suis is a leading cause of bacterial meningitis in South-East Asia, with frequent zoonotic transfer to humans associated with close contact with pigs. A small number of invasive lineages are responsible for endemic infection ...
Genetic association of toxin production in the dinoflagellate Alexandrium minutum [0.03%]
短裸甲藻毒素产生的遗传关联性研究
Lou Mary,Julien Quere,Marie Latimier et al.
Lou Mary et al.
Dinoflagellates of the genus Alexandrium are responsible for harmful algal blooms and produce paralytic shellfish toxins (PSTs). Their very large and complex genomes make it challenging to identify the genes responsible for toxin synthesis....
In silico investigation of the genus Campylobacter type VI secretion system reveals genetic diversity in organization and putative effectors [0.03%]
计算分析营氧菌属型VI分泌系统的遗传多样性及其潜在效应因子
Luca Robinson,Janie Liaw,Zahra Omole et al.
Luca Robinson et al.
Bacterial type VI secretion systems (T6SSs) are contractile nanomachines that deliver proteinic substrates into target prokaryotic or eukaryotic cells and the surrounding milieu. The genus Campylobacter encompasses 39 recognized species a...
Epidemiological links and antimicrobial resistance of clinical Salmonella enterica ST198 isolates: a nationwide microbial population genomic study in Switzerland [0.03%]
临床沙门氏菌ST198分离株的流行病学关联和抗微生物耐药性：瑞士全国范围内的微生物群体基因组研究
Michael Biggel,Jule Horlbog,Magdalena Nüesch-Inderbinen et al.
Michael Biggel et al.
Salmonella is a leading cause of foodborne outbreaks and systemic infections worldwide. Emerging multi-drug resistant Salmonella lineages such as a ciprofloxacin-resistant subclade (CIPR) within Salmonella enterica serovar Kentucky ST198 th...
Dissemination of metaldehyde catabolic pathways is driven by mobile genetic elements in Proteobacteria [0.03%]
质型磷酸酯金属dehyde降解途径的播散是由可移动遗传元件在变形菌门中驱动的
Víctor Castro-Gutierrez,Edward Fuller,María Pilar Garcillán-Barcia et al.
Víctor Castro-Gutierrez et al.
Bioremediation of metaldehyde from drinking water using metaldehyde-degrading strains has recently emerged as a promising alternative. Whole-genome sequencing was used to obtain full genomes for metaldehyde degraders Acinetobacter calcoacet...
Benchmarking taxonomic classifiers with Illumina and Nanopore sequence data for clinical metagenomic diagnostic applications [0.03%]
基于illumina和nanopore序列数据的临床元基因组诊断应用的分类器评测
Kumeren N Govender,David W Eyre
Kumeren N Govender
Culture-independent metagenomic detection of microbial species has the potential to provide rapid and precise real-time diagnostic results. However, it is potentially limited by sequencing and taxonomic classification errors. We use simulat...