Phylodynamic analysis of Salmonella Enteritidis ST183 in Aotearoa New Zealand finds no evidence for introduction via European hedgehogs (Erinaceus europaeus) [0.03%]
Hugo Strydom,Shevaun Paine,David Welch et al.
Hugo Strydom et al.
Salmonella enterica subsp. enterica serovar Enteritidis (S. Enteritidis) is the second most common serovar causing human salmonellosis in Aotearoa New Zealand (NZ). Sequence type (ST)183, which includes phage types 9a and 11, was the second...
Ching-Ying J Poh,David R Greig,Marie Anne Chattaway et al.
Ching-Ying J Poh et al.
Shiga toxin-producing Escherichia coli (STEC) serotype O157:H7 emerged in the 1980s as a cause of foodborne outbreaks of infectious intestinal disease. Over the last decade, whole-genome sequencing (WGS) has replaced phage typing (PT) as th...
Single-cell sequencing reveals unexpected genetic diversity among Bodo spp. flagellates and their bacterial endosymbionts [0.03%]
Sally D Warring,Jamie McGowan,Estelle S Kilias et al.
Sally D Warring et al.
Bodo is a cosmopolitan genus of free-living bacterivorous single-celled flagellates in the class Kinetoplastea. Genus Bodo is considered the closest free-living lineage to the parasitic lineages Trypanosoma and Leishmania, the causative age...
Edouard Bessette,Sam Edwards,Bryony A P Williams
Edouard Bessette
The mass rearing of insects for food and feed is increasing significantly, but it presents challenges in detecting and characterizing pathogens which may cause severe economic losses. Much attention is placed on detecting viruses, bacteria ...
Genetic traits of IncK2 plasmids and the Escherichia coli host underlying the association to the chicken gut [0.03%]
Marta Rozwandowicz,Manal AbuOun,Patricia Alba et al.
Marta Rozwandowicz et al.
This manuscript presents the phylogeny and conservation of IncK2 plasmids in Europe. It also provides insights into genetic traits responsible for IncK2 plasmids and its Escherichia coli host adaptation to the chicken gut. Fifty-eight E. co...
Genomic characterization of invasive disease-causing Streptococcus pneumoniae in Lebanon, 2003-2025 [0.03%]
Fatima Dakroub,Alannah C King,Fata Akl et al.
Fatima Dakroub et al.
Background. Streptococcus pneumoniae is a major human pathogen responsible for invasive pneumococcal diseases (IPDs). We utilized whole-genome sequencing to assess the impact of pneumococcal conjugate vaccines (PCVs) on the pneumococcal pop...
Structural and functional characteristics of faecal, vaginal and colostrum microbiota in high-yielding sows [0.03%]
高产母猪粪便、阴道和初乳微生物的结构和功能特征
Yu Pi,Zixi Wei,Lei Xu et al.
Yu Pi et al.
Recent studies have highlighted the critical roles of the microbiota in faeces, vagina and colostrum in reproductive success and piglet development. Understanding the structural and functional dynamics of these microbial communities is esse...
Vitamin B12-associated interactions between Mesorhizobium sp. TaiHu and Synechococcus sp. PCC 7002 revealed by multi-omics analysis [0.03%]
基于多组学分析的维生素B₁₂介导固氮菌与蓝藻相互作用研究
Gaopeng Liu,Peng Bai,Minglei Ren et al.
Gaopeng Liu et al.
The marine cyanobacterium Synechococcus sp. PCC 7002 (Syn7002) is a model organism that lacks the gene cluster required for vitamin B12 biosynthesis, necessitating cooperative interactions with other microbes. In this study, we established ...
Integrative profiling of Helicobacter pylori clinical isolates: virulence genes, antimicrobial susceptibility and genetic diversity in gastric cancer risk stratification [0.03%]
Helicobacter pylori临床分离株的整合性谱型分析：毒力基因、抗菌敏感性和遗传多样性在胃癌风险分层中的作用
Ying Zhang,Yanyan Shang,Zhenkai Li et al.
Ying Zhang et al.
Background . Helicobacter pylori infection is a major risk factor for gastric cancer (GC), especially in East Asia. However, the mechanisms through which bacterial strain heterogeneity contributes to GC risk remain poorly understood. This s...
Erratum: Global population structure of Shiga toxin-producing Escherichia coli O103:H2 and the variation in their major virulence factor-encoding genetic elements [0.03%]
图改正：产志贺毒素型大肠杆菌O103:H2的全球种群结构及其主要毒力因子编码遗传元件的变异性
Itsuki Taniguchi,Yo Morimoto,Yoko Kimura et al.
Itsuki Taniguchi et al.
Published Erratum
Microbial genomics. 2026 Mar;12(3):001661. DOI:10.1099/mgen.0.001661 2026