A more complete picture: capturing single nucleotide variant diversity in extended-spectrum beta-lactamase producing Escherichia coli using post-enrichment metagenomics [0.03%]
更完整的图景：利用富集后元基因组学方法捕获产超广谱β内酰胺酶大肠埃希氏杆菌的单核苷酸变异多样性
Sarah Gallichan,Tommi Mäklin,Esther Picton-Barlow et al.
Sarah Gallichan et al.
Inferring transmission relies on accurately distinguishing between isolates from the same source and those from different sources, and high-quality genomic data are frequently used to model transmission scenarios. The post-enrichment metage...
NanoPop: Nanopore amplicon sequencing of Salmonella virulence genes to characterize complex mixed serovar populations using k-mers to overcome high sequencing error rates [0.03%]
基于纳米孔扩增子测序的沙门氏菌毒力基因快速表型分型方法研究：利用k-mer克服高错误率识别复杂混合血清型群体
David Ayala-Velastegui,Tatum D Mortimer,Amy T Siceloff et al.
David Ayala-Velastegui et al.
Salmonella enterica comprises over 2,600 genetically distinct serovars, of which 20 are associated with 70% of human illnesses. In food animal production systems, including poultry, mixed serovars commonly exist. Therefore, culture-based ap...
Genomic analysis of environmentally sourced Stenotrophomonas species from Fiji and Australia [0.03%]
来自斐济和澳大利亚的环境来源的Stenotrophomonas物种的基因组分析
Ethan R Wyrsch,Barbara Drigo,Dmitriy Li et al.
Ethan R Wyrsch et al.
The World Health Organization identified Stenotrophomonas maltophilia as an underestimated, multi-drug-resistant and opportunistic nosocomial pathogen. It poses a threat to patients who are immunocompromised, suffering chronic disease, requ...
Public and patient involvement: exploring public partnership in pathogen whole-genome sequencing research and its data visualisation [0.03%]
公众和患者的参与：探索病原体全基因组测序研究及其数据可视化中的公共伙伴关系
Suzanne Rotheram,Hannah Trivett,Jane Whitehurst et al.
Suzanne Rotheram et al.
Published Erratum
Microbial genomics. 2026 Jun;12(6). DOI:10.1099/mgen.0.001763 2026
Erratum: Comparative genomics reveals high prophage diversity and horizontal gene transfer of effectors and phage defence systems in the Pseudomonas syringae complex [0.03%]
图正稿：比较基因组学揭示了假单胞菌属基因效应器和噬菌体防御系统的高多样性及水平基因转移
Dominique Holtappels,George E J Rickus,Túlio Morgan et al.
Dominique Holtappels et al.
Published Erratum
Microbial genomics. 2026 Jun;12(6):001761. DOI:10.1099/mgen.0.001761 2026
Multi-omic characterization of the sow colostrum and milk microbiome and proteome [0.03%]
母猪初乳和奶微生物组和蛋白质组的多组学特征分析
Devin B Holman,Katherine E Gzyl,Arun Kommadath et al.
Devin B Holman et al.
Sow colostrum and milk provide essential nutrients, immune protection and one of the earliest microbial exposures for piglets. However, the microbial composition, functional potential and host interactions of these mammary secretions remain...
Genomic surveillance of post-immunization pneumococcal carriage in Ghana [0.03%]
冈比亚免疫后肺炎链球菌定植的基因组监测
Samuel A Akwetey,Standford Kwenda,Humphrey P K Addy et al.
Samuel A Akwetey et al.
Streptococcus pneumoniae remains a major cause of morbidity and mortality worldwide, especially among children under 5 years of age. The introduction of pneumococcal conjugate vaccines (PCVs) has significantly reduced invasive pneumococcal ...
Gut microbiome of the grape berry moth, Paralobesia viteana (Lepidoptera: Tortricidae) larvae through the grape ripening process revealed by high-throughput 16S and 18S rRNA sequencing [0.03%]
高通量测序分析葡萄成熟过程中副卷叶蛾幼虫肠道微生物群体的变化
Laura Laiton,Flor E Acevedo
Laura Laiton
The grape berry moth (GBM) Paralobesia viteana (Lepidoptera: Tortricidae) is an important pest of grapes in eastern North America. The larvae damage grape clusters by direct feeding and by increasing susceptibility to fungal and bacterial p...
Genomic analysis of antibiotic resistance and virulence factors in the uropathogen Citrobacter koseri [0.03%]
基因组分析抗生素抗性及致病因素在泌尿道病原菌阴沟肠杆菌中的作用
Craig Stephens,Braden Christenson,Emily Patacsil et al.
Craig Stephens et al.
Citrobacter koseri is a significant bacterial cause of community-acquired urinary tract infections in female college students. Given limited previous attention to genomic analysis and molecular epidemiology of this species, whole-genome seq...
Implementation of a high-throughput microfluidic platform for antimicrobial resistance surveillance in swine production systems [0.03%]
一种用于监测生猪生产系统中抗菌药物抗性的高通量微流控平台的实现
Judith Guitart-Matas,Yuliaxis Ramayo-Caldas,Olga González-Rodríguez et al.
Judith Guitart-Matas et al.
Antimicrobial resistance poses a serious threat to public health worldwide and demands interventions with a One Health perspective. A key challenge is determining the collection of antimicrobial resistance genes of a specific environment, a...