Environmental surveillance of bacteria in a new intensive care unit using plate sweeps [0.03%]
平板划线法在新建重症监护室进行细菌环境监测
Aasha McMurray-Jones,Kirsten Spann,Prasad K D V Yarlagadda et al.
Aasha McMurray-Jones et al.
The hospital environment plays a critical role in the transmission of infectious diseases. Surveillance methods often rely on selective enrichment or deep metagenomic sequencing, which both have significant drawbacks in terms of community r...
Tracking a misclassified pathogen: genomic and epidemiological features of Vibrio paracholerae [0.03%]
追踪误分类的病原体：Vibrio paracholerae 的基因组和流行病学特征
Sergio Mascarenhas Morgado,Erica Lourenço da Fonseca,Ana Carolina Paulo Vicente
Sergio Mascarenhas Morgado
The genus Vibrio encompasses globally relevant pathogens, of which Vibrio cholerae is the best known due to its role in cholera. Closely related species within the Cholerae clade - Vibrio paracholerae, Vibrio metoecus and Vibrio tarriae - w...
A public resource of 15 genomically characterized representative strains of Shigella sonnei [0.03%]
宋内志贺菌15个代表株基因组特征及资源的公开发布
Sydney L Miles,Jane Hawkey,Ben Vezina et al.
Sydney L Miles et al.
Shigella sonnei is rapidly emerging as the dominant agent of shigellosis, an enteric disease responsible for a significant burden of morbidity and mortality worldwide. Whole-genome sequencing of S. sonnei isolated over the last three decade...
New insights into the microbiome of the deep-sea sponge Inflatella pellicula and the secondary metabolic potential of metagenome-assembled genomes and the wider microbiome [0.03%]
从深海海绵Inflatella pellicula中获得的微生物组新见解及宏基因组组装基因组和更广泛微生物群的次级代谢潜力
Stephen A Jackson,Pavlo Hrab,Mitja M Zdouc et al.
Stephen A Jackson et al.
Marine sponges are found in all of the world's oceans, from the surface waters to the deepest abyssal zones. The marine sponge holobiont is a rich source of microbial and chemical diversity. Up to 63 bacterial phyla have been observed to be...
The Resistance-Nodulation-Division efflux pump EefABC is highly conserved within lineages of E. coli commonly associated with infection [0.03%]
抵抗-结节-分裂型外排泵EefABC在常见致病性大肠杆菌谱系中高度保守
Hannah L Pugh,Elizabeth M Darby,Leah Burgess et al.
Hannah L Pugh et al.
Resistance-nodulation-division (RND) efflux pumps confer multidrug resistance in Gram-negative bacteria and are critical for many physiological functions including virulence and biofilm formation. The common Escherichia coli laboratory stra...
Kate L Bowerman,Rochelle M Soo,Pierre-Alain Chaumeil et al.
Kate L Bowerman et al.
Despite the recent expansion of culture-independent analyses of animal faecal microbiomes, many lineages remain understudied. Marsupials represent one such group, where, despite their iconic status, direct sequencing-based analyses remain l...
Unravelling the genomic landscape of Canadian Borrelia burgdorferi: a comparison across global strains [0.03%]
解码加拿大Borrelia burgdorferi基因组景观：全球菌株的比较分析
Anthony Piot,Iain L Mainprize,Justin Wood et al.
Anthony Piot et al.
The main agent of Lyme borreliosis (LB) in North America, the bacteria Borrelia burgdorferi, is spreading in Canada following the northward expansion of its primary tick vectors, Ixodes scapularis and Ixodes pacificus. Despite the importanc...
Comparative Study
Microbial genomics. 2026 Jan;12(1). DOI:10.1099/mgen.0.001606 2026
Genomics of Irish swine-derived Streptococcus suis: population structure, prophages and anti-viral defence mechanisms [0.03%]
来自爱尔兰猪源的链球菌基因组：群体结构、前噬菌体和抗病毒防御机制
Emmanuel Kuffour Osei,A Kate O&#x;Mahony,Reuben O&#x;Hea et al.
Emmanuel Kuffour Osei et al.
Streptococcus suis is a major pig pathogen with zoonotic potential, posing an occupational risk to farmers and meat handlers. We characterized 110 S. suis strains from diseased pigs in Ireland (2005-2022) using whole-genome sequencing to in...
Intraspecific microbiome dynamics across the life cycle of the milkweed bug Oncopeltus fasciatus [0.03%]
奶牛豆象Oncopeltus fasciatus生命周期中的种内微生物组动态变化规律
Will Larner,Nádia Thölke da Silva Grego,Kristen A Panfilio
Will Larner
The microbiome is an important part of the complete nutritional and genomic profile of insects. The species-rich insect order Hemiptera (aphids, cicadas and true bugs) is highly diverse for mode of microbiome acquisition, with the conundrum...
The poplar pathogen Sphaerulina musiva has a dynamic genome architecture marked by chromosomal inversions and changes in transposable element abundance [0.03%]
一种杨树病原菌Sphaerulina musiva的动态基因组架构及其转座子丰度变化和染色体倒位现象
Alex Z Zaccaron,Alexandre Lassagne,Kelsey L Søndreli et al.
Alex Z Zaccaron et al.
Fungal plant pathogens possess dynamic genomes, frequently shaped by transposable elements, that enable rapid adaptation to adverse conditions and host resistance mechanisms. However, assessing the adaptive significance of these genomic fea...