Genetic variation in symbiotic islands of natural variant strains of soybean Bradyrhizobium japonicum and Bradyrhizobium diazoefficiens differing in competitiveness and in the efficiency of nitrogen fixation [0.03%]
竞争性和固氮效率不同的大豆根瘤菌天然变种菌株共生岛屿的遗传变异分析
Flavia Raquel Bender,Sheila Tiemi Nagamatsu,Jakeline Renata Marçon Delamuta et al.
Flavia Raquel Bender et al.
Soybean is the most important legume cropped worldwide and can highly benefit from the biological nitrogen fixation (BNF) process. Brazil is recognized for its leadership in the use of inoculants and two strains, Bradyrhizobium japonicum CP...
High molecular weight DNA extraction methods lead to high quality filamentous ascomycete fungal genome assemblies using Oxford Nanopore sequencing [0.03%]
基于牛津纳米孔测序的高质量丝状子囊菌基因组组装需要提取高分子量DNA
Celine Petersen,Trine Sørensen,Klaus R Westphal et al.
Celine Petersen et al.
During the last two decades, whole-genome sequencing has revolutionized genetic research in all kingdoms, including fungi. More than 1000 fungal genomes have been submitted to sequence databases, mostly obtained through second generation sh...
Nationwide surveillance in Thailand revealed genotype-dependent dissemination of carbapenem-resistant Enterobacterales [0.03%]
泰国全国监视发现碳青霉烯耐药肠杆菌目中以基因型依赖性传播为主
Dan Takeuchi,Anusak Kerdsin,Yukihiro Akeda et al.
Dan Takeuchi et al.
Carbapenem-resistant Enterobacterales (CRE) are a serious public health threat because of their rapid dissemination. To determine the epidemiological and genetic characteristics of CRE infections in Thailand, we performed whole-genome seq...
Targeted control of pneumolysin production by a mobile genetic element in Streptococcus pneumoniae [0.03%]
肺炎链球菌中一个可移动的遗传元件对溶血素产生的靶向控制
Emily J Stevens,Daniel J Morse,Dora Bonini et al.
Emily J Stevens et al.
Streptococcus pneumoniae is a major human pathogen that can cause severe invasive diseases such as pneumonia, septicaemia and meningitis. Young children are at a particularly high risk, with an estimated 3-4 million cases of severe disease ...
Jane Hawkey,Hugh Cottingham,Alex Tokolyi et al.
Jane Hawkey et al.
Linear plasmids are extrachromosomal DNA elements that have been found in a small number of bacterial species. To date, the only linear plasmids described in the family Enterobacteriaceae belong to Salmonella, first found in Salmonella ente...
Piperacillin/tazobactam-resistant, cephalosporin-susceptible Escherichia coli bloodstream infections are driven by multiple acquisition of resistance across diverse sequence types [0.03%]
哌拉西林他唑巴坦耐药但头孢类敏感的大肠埃希菌血流感染株的获得性多药抗性驱动了多种序列型的发展
Thomas Edwards,Eva Heinz,Jon van Aartsen et al.
Thomas Edwards et al.
Resistance to piperacillin/tazobactam (TZP) in Escherichia coli has predominantly been associated with mechanisms that confer resistance to third-generation cephalosporins. Recent reports have identified E. coli strains with phenotypic resi...
In silico capsule locus typing for serovar prediction of Actinobacillus pleuropneumoniae [0.03%]
刺鼠胸膜肺炎放线杆菌血清型基因分型的计算机分析方法
Siou-Cen Li,Jing-Fang Huang,Yu-Ting Hung et al.
Siou-Cen Li et al.
Actinobacillus pleuropneumoniae is a causative agent of pleuropneumonia in pigs of all ages. A . pleuropneumoniae is divided into 19 serovars based on capsular polysaccharides (CPSs) and lipopolysaccharides. The serovars of isolates are...
Pathogenomes and variations in Shiga toxin production among geographically distinct clones of Escherichia coli O113:H21 [0.03%]
志贺毒素产生菌基因组和变异地理不同的O113:H21大肠杆菌克隆中的志贺毒素产生菌基因组和变异
Anna Allué-Guardia,Sara S K Koenig,Ricardo A Martinez et al.
Anna Allué-Guardia et al.
Infections with globally disseminated Shiga toxin-producing Escherichia coli (STEC) of the O113:H21 serotype can progress to severe clinical complications, such as hemolytic uremic syndrome (HUS). Two phylogeographically distinct clonal com...
Dissemination of a single ST11 clone of OXA-48-producing Klebsiella pneumoniae within a large polyclonal hospital outbreak determined by genomic sequencing [0.03%]
基于基因组测序的产OXA-48型酶肺炎克雷伯菌ST11单株在大型多克隆医院暴发中的传播分析
Fernando Lázaro-Perona,Elias Dahdouh,Alma Sotillo et al.
Fernando Lázaro-Perona et al.
The population structure of a set of OXA-48-producing Klebsiella pneumoniae isolates belonging to sequence type 11 (ST11 Kp-OXA) and obtained from two hospitals in Madrid in the period from 2012 to 2015 was studied by genome sequencing. O...
K-mer based prediction of Clostridioides difficile relatedness and ribotypes [0.03%]
基于K-mer的艰难梭菌相关性和血清型预测
Matthew Phillip Moore,Mark H Wilcox,A Sarah Walker et al.
Matthew Phillip Moore et al.
Comparative analysis of Clostridioides difficile whole-genome sequencing (WGS) data enables fine scaled investigation of transmission and is increasingly becoming part of routine surveillance. However, these analyses are constrained by the ...