FishPi: a bioinformatic prediction tool to link piRNA and transposable elements [0.03%]
FishPi：一个用于链接piRNA和转座元件的生物信息预测工具
Alice M Godden,Benjamin Rix,Simone Immler
Alice M Godden
Background: Piwi-interacting RNAs (piRNA)s are non-coding small RNAs that post-transcriptionally affect gene expression and regulation. Through complementary seed region binding with transposable elements (TEs), piRNAs pr...
SINE retrotransposons import polyadenylation signals to 3'UTRs in dog (Canis familiaris) [0.03%]
反转座子SINE将多腺苷酸化信号导入狗(Canis familiaris)的3′非翻译区（3'UTR）中
Jessica D Choi,Lelani A Del Pinto,Nathan B Sutter
Jessica D Choi
Background: Messenger RNA 3' untranslated regions (3'UTRs) control many aspects of gene expression and determine where the transcript will terminate. The polyadenylation signal (PAS) AAUAAA (AATAAA in DNA) is a key regula...
Controlling and controlled elements: highlights of the year in mobile DNA research [0.03%]
控制与被控元素：移动DNA研究的年度亮点
Irina R Arkhipova,Kathleen H Burns,Pascale Lesage
Irina R Arkhipova
Analysis of pericentromere composition and structure elucidated the history of the Hieracium alpinum L. genome, revealing waves of transposable elements insertions [0.03%]
外卫基因组历史分析揭示了多年生黄花属植物转座子插入的多次浪潮
Alexander Belyayev,Begoña Quirós de la Peña,Simon Villanueva Corrales et al.
Alexander Belyayev et al.
Background: The centromere is one of the key regions of the eukaryotic chromosome. While maintaining its function, centromeric DNA may differ among closely related species. Here, we explored the composition and structure ...
International congress on transposable elements (ICTE 2024) in Saint Malo: breaking down transposon waves and their impact [0.03%]
圣马洛国际转座元件大会（ICTE 2024）：分解转座子浪潮及其影响
Pascale Lesage,Emilie Brasset,Gael Cristofari et al.
Pascale Lesage et al.
From April 20 to 23, 2024, three hundred ten researchers from around the world gathered in Saint-Malo, France, at the fourth International Congress on Transposable Elements (ICTE 2024), to present their most recent discoveries on transposab...
Association of hyperactivated transposon expression with exacerbated immune activation in systemic lupus erythematosus [0.03%]
系统性红斑狼疮中转座子表达过度活化与免疫激活加剧的相关性研究
Frank Qingyun Wang,Xiao Dang,Huidong Su et al.
Frank Qingyun Wang et al.
Background: Systemic Lupus Erythematosus (SLE) is a complex autoimmune disorder, and transposable elements (TEs) have been hypothesized to play a significant role in its development. However, limited research has explored...
Herui Liao,Yanni Sun,Shujun Ou
Herui Liao
Genome annotation is an important but challenging task. Accurate identification of short interspersed nuclear elements (SINEs) is particularly difficult due to their lack of highly conserved sequences. AnnoSINE is state-of-the-art software ...
Widespread HCD-tRNA derived SINEs in bivalves rely on multiple LINE partners and accumulate in genic regions [0.03%]
软体动物中普遍存在的一种由HCD-tRNA衍生的SINE依赖多种LINE并主要在基因区内积累的现象
Jacopo Martelossi,Mariangela Iannello,Fabrizio Ghiselli et al.
Jacopo Martelossi et al.
Background: Short interspersed nuclear elements (SINEs) are non-autonomous non-LTR retrotransposons widespread across eukaryotes. They exist both as lineage-specific, fast-evolving elements and as ubiquitous superfamilies...
Correction: Transposon-derived introns as an element shaping the structure of eukaryotic genomes [0.03%]
Correction: 转座子衍生的内含子作为塑造真核生物基因组结构的元件
Weronika Mikina,Paweł Hałakuc,Rafał Milanowski
Weronika Mikina
Published Erratum
Mobile DNA. 2024 Oct 12;15(1):21. DOI:10.1186/s13100-024-00329-6 2024
Transposable Element (TE) insertion predictions from RNAseq inputs and TE impact on RNA splicing and gene expression in Drosophila brain transcriptomes [0.03%]
来自Drosophila脑转录组的RNAseq输入中的可移动元件（TE）插入预测以及TE对RNA剪接和基因表达的影响
Md Fakhrul Azad,Tong Tong,Nelson C Lau
Md Fakhrul Azad
Recent studies have suggested that Transposable Elements (TEs) residing in introns frequently splice into and alter primary gene-coding transcripts. To re-examine the exonization frequency of TEs into protein-coding gene transcripts, we re-...