Widespread HCD-tRNA derived SINEs in bivalves rely on multiple LINE partners and accumulate in genic regions [0.03%]
软体动物中普遍存在的一种由HCD-tRNA衍生的SINE依赖多种LINE并主要在基因区内积累的现象
Jacopo Martelossi,Mariangela Iannello,Fabrizio Ghiselli et al.
Jacopo Martelossi et al.
Background: Short interspersed nuclear elements (SINEs) are non-autonomous non-LTR retrotransposons widespread across eukaryotes. They exist both as lineage-specific, fast-evolving elements and as ubiquitous superfamilies...
Correction: Transposon-derived introns as an element shaping the structure of eukaryotic genomes [0.03%]
Correction: 转座子衍生的内含子作为塑造真核生物基因组结构的元件
Weronika Mikina,Paweł Hałakuc,Rafał Milanowski
Weronika Mikina
Published Erratum
Mobile DNA. 2024 Oct 12;15(1):21. DOI:10.1186/s13100-024-00329-6 2024
Transposable Element (TE) insertion predictions from RNAseq inputs and TE impact on RNA splicing and gene expression in Drosophila brain transcriptomes [0.03%]
来自Drosophila脑转录组的RNAseq输入中的可移动元件（TE）插入预测以及TE对RNA剪接和基因表达的影响
Md Fakhrul Azad,Tong Tong,Nelson C Lau
Md Fakhrul Azad
Recent studies have suggested that Transposable Elements (TEs) residing in introns frequently splice into and alter primary gene-coding transcripts. To re-examine the exonization frequency of TEs into protein-coding gene transcripts, we re-...
A T cell receptor specific for an HLA-A*03:01-restricted epitope in the endogenous retrovirus ERV-K-Env exhibits limited recognition of its cognate epitope [0.03%]
一个特异识别内源性逆转录病毒ERV-K-Env的HLA-A*03:01限制性表位的T细胞受体仅限于对其相应表位的识别
Erin E Grundy,Lauren C Shaw,Loretta Wang et al.
Erin E Grundy et al.
Transposable elements (TEs) are often expressed at higher levels in tumor cells than normal cells, implicating these genomic regions as an untapped pool of tumor-associated antigens. In ovarian cancer (OC), protein from the TE ERV-K is freq...
Transposable elements in Drosophila montana from harsh cold environments [0.03%]
来自动物寒冷环境中的Drosophila montana转座元件分析
Mohadeseh S Tahami,Carlos Vargas-Chavez,Noora Poikela et al.
Mohadeseh S Tahami et al.
Background: Substantial discoveries during the past century have revealed that transposable elements (TEs) can play a crucial role in genome evolution by affecting gene expression and inducing genetic rearrangements, amon...
Identification and functional analysis of recent IS transposition events in rhizobia [0.03%]
农杆菌中最近转座的IS元件的鉴定及功能分析
Ezequiel G Mogro,Walter O Draghi,Antonio Lagares et al.
Ezequiel G Mogro et al.
Rhizobia are alpha- and beta- Proteobacteria that, through the establishment of symbiotic interactions with leguminous plants, are able to fix atmospheric nitrogen as ammonium. The successful establishment of a symbiotic interaction is high...
Evolution of Einkorn wheat centromeres is driven by the mutualistic interplay of two LTR retrotransposons [0.03%]
两个长末端重复序列逆转录转座子的互利互作驱动意大利粗穗小麦染色体进化
Matthias Heuberger,Dal-Hoe Koo,Hanin Ibrahim Ahmed et al.
Matthias Heuberger et al.
Background: Centromere function is highly conserved across eukaryotes, but the underlying centromeric DNA sequences vary dramatically between species. Centromeres often contain a high proportion of repetitive DNA, such as...
Transposon-derived introns as an element shaping the structure of eukaryotic genomes [0.03%]
转座子衍生内含子作为塑造真核生物基因组结构的元件
Weronika Mikina,Paweł Hałakuc,Rafał Milanowski
Weronika Mikina
The widely accepted hypothesis postulates that the first spliceosomal introns originated from group II self-splicing introns. However, it is evident that not all spliceosomal introns in the nuclear genes of modern eukaryotes are inherited t...
Subcellular location of L1 retrotransposon-encoded ORF1p, reverse transcription products, and DNA sensors in lupus granulocytes [0.03%]
系统性红斑狼疮粒细胞中L1逆转座子编码的ORF1p、逆转录产物及DNA感受器的亚细胞定位
Fatemeh Moadab,Sepideh Sohrabi,Xiaoxing Wang et al.
Fatemeh Moadab et al.
Background: Systemic lupus erythematosus (SLE) is a chronic autoimmune disease with an unpredictable course of recurrent exacerbations alternating with more stable disease. SLE is characterized by broad immune activation ...
Identification of transposable element families from pangenome polymorphisms [0.03%]
从泛基因组多态性中识别转座元件家族
Pío Sierra,Richard Durbin
Pío Sierra
Background: Transposable Elements (TEs) are segments of DNA, typically a few hundred base pairs up to several tens of thousands bases long, that have the ability to generate new copies of themselves in the genome. Most ex...