Identification and characterization of ERV-W-like sequences in Platyrrhini species provides new insights into the evolutionary history of ERV-W in primates [0.03%]
在灵长类ERV-W进化史研究中普拉蒂里尼序列的鉴定与表征提供了新见解
Nicole Grandi,Maria Paola Pisano,Martina Demurtas et al.
Nicole Grandi et al.
Background: Endogenous Retroviruses (ERVs) constitute approximately 8% of every human genome and are relics of ancestral infections that affected the germ line cells. The ERV-W group contributed to primate physiology by p...
Compensating for over-production inhibition of the Hsmar1 transposon in Escherichia coli using a series of constitutive promoters [0.03%]
使用一系列组成型启动子补偿大肠杆菌中Hsmar1转座子过量产生抑制作用
Michael Tellier,Ronald Chalmers
Michael Tellier
Background: Transposable elements (TEs) are a diverse group of self-mobilizing DNA elements. Transposition has been exploited as a powerful tool for molecular biology and genomics. However, transposition is sometimes limi...
SINE Retrotransposon variation drives Ecotypic disparity in natural populations of Coilia nasus [0.03%]
SINE反转转座子变异驱动自然群体刀鱼生态型分化
Dong Liu,Jinquan Yang,Wenqiao Tang et al.
Dong Liu et al.
Background: SINEs are a type of nonautonomous retrotransposon that can transpose from one site to be integrated elsewhere in an organism genome. SINE insertion can give rise to genetic variants and regulate gene expressio...
Correction to: Nested plant LTR retrotransposons target specific regions of other elements, while all LTR retrotransposons often target palindromes and nucleosome-occupied regions: in silico study [0.03%]
对发表在《基因组学》上的“植物内含子LTR古病毒特异嵌套及其对宿主影响的全面分析”的修正通知
Pavel Jedlicka,Matej Lexa,Ivan Vanat et al.
Pavel Jedlicka et al.
[This corrects the article DOI: 10.1186/s13100-019-0186-z.]. © The Author(s). 2020.
Published Erratum
Mobile DNA. 2020 Jan 7:11:3. DOI:10.1186/s13100-019-0199-7 2020
Comparative analysis on the expression of L1 loci using various RNA-Seq preparations [0.03%]
不同RNA-SEQ文库构建方法对L1元件表达量测定的影响分析
Tiffany Kaul,Maria E Morales,Alton O Sartor et al.
Tiffany Kaul et al.
Background: Retrotransposons are one of the oldest evolutionary forces shaping mammalian genomes, with the ability to mobilize from one genomic location to another. This mobilization is also a significant factor in human ...
LINE-1 ORF2p expression is nearly imperceptible in human cancers [0.03%]
LINE-1 ORF2p在人类癌症中的表达可以忽略不计
Daniel Ardeljan,Xuya Wang,Mehrnoosh Oghbaie et al.
Daniel Ardeljan et al.
Background: Long interspersed element-1 (LINE-1, L1) is the major driver of mobile DNA activity in modern humans. When expressed, LINE-1 loci produce bicistronic transcripts encoding two proteins essential for retrotransp...
Pol Vendrell-Mir,Fabio Barteri,Miriam Merenciano et al.
Pol Vendrell-Mir et al.
Background: Transposable elements (TEs) are an important source of genomic variability in eukaryotic genomes. Their activity impacts genome architecture and gene expression and can lead to drastic phenotypic changes. Ther...
Tools and best practices for retrotransposon analysis using high-throughput sequencing data [0.03%]
基于高通量测序数据的转座子分析工具及最佳实践
Aurélie Teissandier,Nicolas Servant,Emmanuel Barillot et al.
Aurélie Teissandier et al.
Background: Sequencing technologies give access to a precise picture of the molecular mechanisms acting upon genome regulation. One of the biggest technical challenges with sequencing data is to map millions of reads to a...
A re-evaluation of LINE-1 ORF2 expression in LNCaP prostate cancer cells [0.03%]
LNCaP前列腺癌细胞中LINE-1orf2表达的再评估研究
Erica M Briggs,Corrado Spadafora,Susan K Logan
Erica M Briggs
Background: We previously examined expression of Long Interspersed Element-1 (LINE-1) in a variety of prostate cancer cells including hormone-dependent LNCaP cells. These studies demonstrated expression and sub-cellular l...
Nested plant LTR retrotransposons target specific regions of other elements, while all LTR retrotransposons often target palindromes and nucleosome-occupied regions: in silico study [0.03%]
嵌套植物LTR反转座子倾向于插入特定类别的宿主DNA序列：基于计算的研究
Pavel Jedlicka,Matej Lexa,Ivan Vanat et al.
Pavel Jedlicka et al.
Background: Nesting is common in LTR retrotransposons, especially in large genomes containing a high number of elements. Results: We an...