Chromosome-level genome assembly and demographic history of Euryodendron excelsum in monotypic genus endemic to China [0.03%]
中国特有单种属圆果化香树的染色体级别基因组组装及群体历史分析
Zheng-Feng Wang,Lin Fu,En-Ping Yu et al.
Zheng-Feng Wang et al.
Euryodendron excelsum is in a monotypic genus Euryodendron, endemic to China. It has intermediate morphisms in the Pentaphylacaceae or Theaceae families, which make it distinct. Due to anthropogenic disturbance, E. excelsum is currently fou...
MCPtaggR: R package for accurate genotype calling in reduced representation sequencing data by eliminating error-prone markers based on genome comparison [0.03%]
MCPtaggR：通过基于基因组比较消除易出错标记来对减少代表性测序数据进行准确基因分型的R包
Tomoyuki Furuta,Toshio Yamamoto
Tomoyuki Furuta
Reduced representation sequencing (RRS) offers cost-effective, high-throughput genotyping platforms such as genotyping-by-sequencing (GBS). RRS reads are typically mapped onto a reference genome. However, mapping reads harbouring mismatches...
Churros: a Docker-based pipeline for large-scale epigenomic analysis [0.03%]
Churros：一种基于Docker的表观基因组学大规模分析流程
Jiankang Wang,Ryuichiro Nakato
Jiankang Wang
The epigenome, which reflects the modifications on chromatin or DNA sequences, provides crucial insight into gene expression regulation and cellular activity. With the continuous accumulation of epigenomic datasets such as chromatin immunop...
Genome features of a novel hydrocarbonoclastic Chryseobacterium oranimense strain and its comparison to bacterial oil-degraders and to other C. oranimense strains [0.03%]
一株新型高效降解烃类化合物的金黄杆菌属新种全基因组序列特征及与细菌油降解菌和其他C.oranimense菌株比较分析
Amanda Christine Ramdass,Sephra Nalini Rampersad
Amanda Christine Ramdass
For the first time, we report the whole genome sequence of a hydrocarbonoclastic Chryseobacterium oranimense strain isolated from Trinidad and Tobago (COTT) and its genes involved in the biotransformation of hydrocarbons and xenobiotics thr...
Telomere-to-telomere genome assembly of an allotetraploid pernicious weed, Echinochloa phyllopogon [0.03%]
一种有毒杂合四倍体狗尾草的端粒到端粒基因组组装（Echinochloa phyllopogon）
Mitsuhiko P Sato,Satoshi Iwakami,Kanade Fukunishi et al.
Mitsuhiko P Sato et al.
Echinochloa phyllopogon is an allotetraploid pernicious weed species found in rice fields worldwide that often exhibit resistance to multiple herbicides. An accurate genome sequence is essential to comprehensively understand the genetic bas...
Metagenomic Thermometer [0.03%]
元基因组温度计
Masaomi Kurokawa,Koichi Higashi,Keisuke Yoshida et al.
Masaomi Kurokawa et al.
Various microorganisms exist in environments, and each of them has its optimal growth temperature (OGT). The relationship between genomic information and OGT of each species has long been studied, and one such study revealed that OGT of pro...
Chromosome-level assembly and annotation of the Xyrichtys novacula (Linnaeus, 1758) genome [0.03%]
Xyrichtys novacula（Linnaeus，1758）基因组的染色体水平组装和注释
Fernando Cruz,Jèssica Gómez-Garrido,Marta Gut et al.
Fernando Cruz et al.
The pearly razorfish (Xyrichtys novacula), commonly known as raor in the Balearic Islands, is a wrasse within the family Labridae. This fish species has particular biological and socio-cultural characteristics making it an ideal model organ...
Unravelling the genomic features, phylogeny and genetic basis of tooth ontogenesis in Characiformes through analysis of four genomes [0.03%]
通过四个基因组分析梳理鲤形目鱼类的基因组特征、系统发育和牙齿发生遗传基础
Xianwei Yang,Yue Song,Rui Zhang et al.
Xianwei Yang et al.
Characiformes is a diverse and evolutionarily significant order of freshwater fish encompassing over 2,300 species. Despite its diversity, our understanding of Characiformes' evolutionary relationships and adaptive mechanisms is limited due...
Evolution of the viral genomes of SARS-CoV-2 in association with the changes in local condition: a genomic epidemiological study of a suburban city of Japan [0.03%]
SARS-CoV-2病毒基因组与当地条件变化相关的进化研究：日本近郊城市的一项基因组流行病学研究
Yukie Kashima,Taketoshi Mizutani,Yuki Okimoto et al.
Yukie Kashima et al.
Understanding the factors driving the spread and evolution of severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) at the local, regional, national, and international levels is important in protecting against future pandemics. By ex...
Genome and transcriptome analyses reveal genes involved in the formation of fine ridges on petal epidermal cells in Hibiscus trionum [0.03%]
基因组和转录组分析揭示了睡莲属木槿细皱纹表皮细胞形成的基因
Shizuka Koshimizu,Sachiko Masuda,Arisa Shibata et al.
Shizuka Koshimizu et al.
Hibiscus trionum, commonly known as the 'Flower of an Hour', is an easily cultivated plant in the Malvaceae family that is widespread in tropical and temperate regions, including drylands. The purple base part of its petal exhibits structur...