The value of structural variants to conservation genomics in the pangenome era [0.03%]
泛基因组时代结构变异在保护基因组学中的价值
Teresa M Pegan,Ashwin Sivakumar,Christian Burns et al.
Teresa M Pegan et al.
Structural variants (SVs) comprise an axis of genetic diversity with strong consequences for phenotype and fitness, making them a potentially important target for conservation genomics. Here we review how and why SVs can play a role in in c...
A chromosome level genome assembly of the marine flowering plant, Torrey's surfgrass (Phyllospadix torreyi) reveals an exceptionally large Y-chromosome [0.03%]
唐氏海藻（Phyllospadix torreyi）的染色体水平基因组草图显示了一个特别大的Y染色体
Jason Johns,Malia Moore,Merly Escalona et al.
Jason Johns et al.
Phyllospadix spp. (surfgrass) are flowering plants and keystone species in the rocky intertidal and subtidal environments of the North Pacific Ocean. Here we report a chromosome level assembly for P. torreyi, which occurs along the coast of...
PRNP variant frequencies in Roosevelt and Rocky Mountain elk (Cervus canadensis) from Oregon and their implications for chronic wasting disease [0.03%]
俄勒冈州罗斯福 elk 和落基山 elk (Cervus canadensis) 的 PRNP 变异频率及其对慢性消耗病的影响
Yasuko Ishida,Brian C Hamlin,Richard L Green et al.
Yasuko Ishida et al.
Chronic wasting disease (CWD) is a fatal disease in cervids caused by abnormally folded proteins known as prions. Since its identification in 1967, CWD has spread to wild cervid populations in 36 U.S. states. Some variants in the prion prot...
A Chromosome-Level Genome Assembly of the Texas Ocelot (Leopardus pardalis albescens) [0.03%]
德州豹猫（Leopardus pardalis albescens）的染色体水平基因组组装
Nicole M Foley,Emma Brookover,Michael E Tewes et al.
Nicole M Foley et al.
The ocelot, Leopardus pardalis, is a medium-size member of the cat family Felidae found throughout the Neotropics. This solitary, nocturnal species is of increasing conservation concern in the United States due to habitat loss and fragmenta...
Past Genomes Guide Future Conservation: Insights from Extinct Populations of the Endangered Pacific Pocket Mouse [0.03%]
借镜过去，保护未来：灭绝鼠种的基因组为濒危的太平洋鼠属提供新思路
Erik R Funk,Caitlin J Curry,Scott Tremor et al.
Erik R Funk et al.
Efforts to recover endangered species often rely on restoring populations to their historical range, yet reestablishing lost genetic variation is challenging when the ancestral genetic landscape is poorly understood. The Pacific pocket mous...
Chromosome-level genome assembly of Norwegian wild alpine reindeer (Rangifer tarandus tarandus) [0.03%]
挪威野生驯鹿（Rangifer tarandus tarandus）染色体水平基因组组装
Ole K Tørresen,Ave Tooming-Klunderud,Morten Skage et al.
Ole K Tørresen et al.
We describe a chromosome-level genome assembly from a wild alpine reindeer individual (Rangifer tarandus tarandus) from the Rondane area in Southern Norway. The assembly is resolved into two pseudo-haplotypes: hap 1 spanning 3,081 megabases...
Bridging the Gap Between Legacy PCR-based Microsatellite Data with High-Throughput Sequencing Data in Conservation Genomics [0.03%]
连接基于PCR的传统微卫星数据与高通量测序数据在保护基因组学中的桥梁作用
Dalya Salih,Ellie E Armstrong,Charles T Robbins et al.
Dalya Salih et al.
Microsatellites are powerful markers for tracking genetic variation in wildlife populations due to their high polymorphism and genome-wide abundance. While PCR-based fragment size analysis has been the standard for genotyping microsatellite...
Genomic resources for comparative analyses of obligate avian brood parasitism [0.03%]
obligate鸟类寄生的基因组资源比较分析
Rachel A Carroll,Edward S Ricemeyer,LaDeana W Hillier et al.
Rachel A Carroll et al.
Examples of convergent evolution, wherein distantly related organisms evolve similar traits, including behaviors, underscore the adaptive power of natural selection. In birds, obligate brood parasitism, and the associated loss of parental c...
Transcriptomics of feeding and reproductive stages of the South American cactus moth [0.03%]
南美仙人掌象鼻蛾进食和繁殖阶段的转录组学研究
Daniel Poveda-Martínez,Nicolás Nahuel Moreyra,Jose Manuel Latorre Estivalis et al.
Daniel Poveda-Martínez et al.
The cactus moth, Cactoblastis cactorum, native to southern South America, has extended its range throughout Florida, north to coastal South Carolina and west to Texas in the United States and the Caribbean region, posing a threat to native ...
Genome assembly and annotation of a deep-diving pinniped, the northern elephant seal (Mirounga angustirostris) [0.03%]
北方象海豹（Mirounga angustirostris）的基因组组装和注释
Milagros G Rivera,Merly Escalona,John Carlos Garza et al.
Milagros G Rivera et al.
The northern elephant seal (Mirounga angustirostris) is the largest pinniped species in the northern hemisphere. The species is classified as being of least conservation concern by the IUCN-a triumph of conservation efforts despite hunting ...