Novel Chromosome-Length Genome Assemblies of Three Distinct Subspecies of Pine Marten, Sable, and Yellow-Throated Marten (Genus Martes, Family Mustelidae) [0.03%]
三种不同亚种的石貂、紫貂和喉斑野猪(Martes属,Mustelidae科)的新染色体长度基因组组装结果
Andrey A Tomarovsky,Ruqayya Khan,Olga Dudchenko et al.
Andrey A Tomarovsky et al.
The genus Martes consists of medium-sized carnivores within the family Mustelidae that are commonly known as martens, many of which exhibit extensive geographic variation and taxonomic uncertainty. Here, we report chromosome-length genome a...
Low genetic diversity of major histocompatibility complex class II DQB gene in wild rhesus and long-tailed macaques in Thailand reflects purifying selection and poses risks to population health [0.03%]
泰国野生食蟹猴和长尾猕猴的主要组织相容性复合体II类DQB基因低多样性反映了纯化选择并威胁种群健康
Worapong Singchat,Wongsathit Wongloet,Trifan Budi et al.
Worapong Singchat et al.
Rhesus (Macaca mulatta) and long-tailed (M. fascicularis) macaques, important for biomedical research, are distributed across Thailand, and hybridization and introgression between species influence genetic diversity, potentially leading to ...
Improved, annotated reference genome for the highly polyphagous moth Hyphantria cunea (Fall webworm) [0.03%]
改良后的高度杂食性昆虫Hyphantria cunea(秋幕毛虫)的参考基因组及注释
William Maguire,Mattheau Comerford,Lily Shiue et al.
William Maguire et al.
Fall webworm (Hyphantria cunea) is a widespread, highly polyphagous moth in the family Erebidae, whose native range spans much of North America and invasive range includes Asia and Europe. The species uses over 600 plant species as a larval...
The value of structural variants to conservation genomics in the pangenome era [0.03%]
泛基因组时代结构变异在保护基因组学中的价值
Teresa M Pegan,Ashwin Sivakumar,Christian Burns et al.
Teresa M Pegan et al.
Structural variants (SVs) comprise an axis of genetic diversity with strong consequences for phenotype and fitness, making them a potentially important target for conservation genomics. Here we review how and why SVs can play a role in in c...
A chromosome level genome assembly of the marine flowering plant, Torrey's surfgrass (Phyllospadix torreyi) reveals an exceptionally large Y-chromosome [0.03%]
唐氏海藻(Phyllospadix torreyi)的染色体水平基因组草图显示了一个特别大的Y染色体
Jason Johns,Malia Moore,Merly Escalona et al.
Jason Johns et al.
Phyllospadix spp. (surfgrass) are flowering plants and keystone species in the rocky intertidal and subtidal environments of the North Pacific Ocean. Here we report a chromosome level assembly for P. torreyi, which occurs along the coast of...
PRNP variant frequencies in Roosevelt and Rocky Mountain elk (Cervus canadensis) from Oregon and their implications for chronic wasting disease [0.03%]
俄勒冈州罗斯福 elk 和落基山 elk (Cervus canadensis) 的 PRNP 变异频率及其对慢性消耗病的影响
Yasuko Ishida,Brian C Hamlin,Richard L Green et al.
Yasuko Ishida et al.
Chronic wasting disease (CWD) is a fatal disease in cervids caused by abnormally folded proteins known as prions. Since its identification in 1967, CWD has spread to wild cervid populations in 36 U.S. states. Some variants in the prion prot...
A Chromosome-Level Genome Assembly of the Texas Ocelot (Leopardus pardalis albescens) [0.03%]
德州豹猫(Leopardus pardalis albescens)的染色体水平基因组组装
Nicole M Foley,Emma Brookover,Michael E Tewes et al.
Nicole M Foley et al.
The ocelot, Leopardus pardalis, is a medium-size member of the cat family Felidae found throughout the Neotropics. This solitary, nocturnal species is of increasing conservation concern in the United States due to habitat loss and fragmenta...
Past Genomes Guide Future Conservation: Insights from Extinct Populations of the Endangered Pacific Pocket Mouse [0.03%]
借镜过去,保护未来:灭绝鼠种的基因组为濒危的太平洋鼠属提供新思路
Erik R Funk,Caitlin J Curry,Scott Tremor et al.
Erik R Funk et al.
Efforts to recover endangered species often rely on restoring populations to their historical range, yet reestablishing lost genetic variation is challenging when the ancestral genetic landscape is poorly understood. The Pacific pocket mous...
Chromosome-level genome assembly of Norwegian wild alpine reindeer (Rangifer tarandus tarandus) [0.03%]
挪威野生驯鹿(Rangifer tarandus tarandus)染色体水平基因组组装
Ole K Tørresen,Ave Tooming-Klunderud,Morten Skage et al.
Ole K Tørresen et al.
We describe a chromosome-level genome assembly from a wild alpine reindeer individual (Rangifer tarandus tarandus) from the Rondane area in Southern Norway. The assembly is resolved into two pseudo-haplotypes: hap 1 spanning 3,081 megabases...
Bridging the Gap Between Legacy PCR-based Microsatellite Data with High-Throughput Sequencing Data in Conservation Genomics [0.03%]
连接基于PCR的传统微卫星数据与高通量测序数据在保护基因组学中的桥梁作用
Dalya Salih,Ellie E Armstrong,Charles T Robbins et al.
Dalya Salih et al.
Microsatellites are powerful markers for tracking genetic variation in wildlife populations due to their high polymorphism and genome-wide abundance. While PCR-based fragment size analysis has been the standard for genotyping microsatellite...