BS-KNN: An Effective Algorithm for Predicting Protein Subchloroplast Localization [0.03%]
BS-KNN：一种有效的蛋白质亚叶绿体定位预测算法
Jing Hu,Xianghe Yan
Jing Hu
Chloroplasts are organelles found in cells of green plants and eukaryotic algae that conduct photosynthesis. Knowing a protein's subchloroplast location provides in-depth insights about the protein's function and the microenvironment where ...
EvoluCode: Evolutionary Barcodes as a Unifying Framework for Multilevel Evolutionary Data [0.03%]
基于多级演化数据的进化条形码统一框架:EvoluCode
Benjamin Linard,Ngoc Hoan Nguyen,Francisco Prosdocimi et al.
Benjamin Linard et al.
Evolutionary systems biology aims to uncover the general trends and principles governing the evolution of biological networks. An essential part of this process is the reconstruction and analysis of the evolutionary histories of these compl...
SAFE Software and FED Database to Uncover Protein-Protein Interactions using Gene Fusion Analysis [0.03%]
基于基因融合分析揭示蛋白质-蛋白质相互作用的SAFE软件和FED数据库
Dimosthenis Tsagrasoulis,Vasilis Danos,Maria Kissa et al.
Dimosthenis Tsagrasoulis et al.
Domain Fusion Analysis takes advantage of the fact that certain proteins in a given proteome A, are found to have statistically significant similarity with two separate proteins in another proteome B. In other words, the result of a fusion ...
LCGbase: A Comprehensive Database for Lineage-Based Co-regulated Genes [0.03%]
LCGbase：基于谱系的协同调节基因综合数据库
Dapeng Wang,Yubin Zhang,Zhonghua Fan et al.
Dapeng Wang et al.
Animal genes of different lineages, such as vertebrates and arthropods, are well-organized and blended into dynamic chromosomal structures that represent a primary regulatory mechanism for body development and cellular differentiation. The ...
Laura M Boykin,Karen F Armstrong,Laura Kubatko et al.
Laura M Boykin et al.
Species delimitation directly impacts on global biosecurity. It is a critical element in the decisions made by national governments in regard to the flow of trade and to the biosecurity measures imposed to protect countries from the threat ...
Evolution of antifreeze protein genes in the diatom genus fragilariopsis: evidence for horizontal gene transfer, gene duplication and episodic diversifying selection [0.03%]
棱皮藻属冰冻蛋白基因的演化：关于水平基因转移、基因复制和表型分歧选择的证据
Ulf Sorhannus
Ulf Sorhannus
Hypotheses about horizontal transfer of antifreeze protein genes to ice-living diatoms were addressed using two different statistical methods available in the program Prunier. The role of diversifying selection in driving the differentiatio...
Factors affecting synonymous codon usage bias in chloroplast genome of oncidium gower ramsey [0.03%]
影响 Oncidium gower ramsey 叶绿体基因组同义密码子使用偏好的因素
Chen Xu,Xiaoning Cai,Quanzhan Chen et al.
Chen Xu et al.
Oncidium Gower Ramsey is a fascinating and important ornamental flower in floral industry. In this research, the complete nucleotide sequence of the chloroplast genome in Oncidium Gower Ramsey was studied, then analyzed using Codonw softwar...
ColorPhylo: A Color Code to Accurately Display Taxonomic Classifications [0.03%]
ColorPhylo：一种准确显示分类信息的颜色编码方案
Sylvain Lespinats,Bernard Fertil
Sylvain Lespinats
Color may be very useful to visualise complex data. As far as taxonomy is concerned, color may help observing various species' characteristics in correlation with classification. However, choosing the number of subclasses to display is ofte...
On the Interplay between the Evolvability and Network Robustness in an Evolutionary Biological Network: A Systems Biology Approach [0.03%]
系统生物学方法研究进化生物网络中可演化性和网络鲁棒性的相互作用关系
Bor-Sen Chen,Ying-Po Lin
Bor-Sen Chen
In the evolutionary process, the random transmission and mutation of genes provide biological diversities for natural selection. In order to preserve functional phenotypes between generations, gene networks need to evolve robustly under the...
Characterization and inference of gene gain/loss along burkholderia evolutionary history [0.03%]
芽抱杆菌进化史中基因增益和损失的特征及推理
Bo Zhu,Shengli Zhou,Miaomiao Lou et al.
Bo Zhu et al.
A comparative analysis of 60 complete Burkholderia genomes was conducted to obtain insight in the evolutionary history behind the diversity and pathogenicity at species level. A concatenated multiprotein phyletic pattern and a dataset with ...