Effective Encoding for DNA Sequence Visualization Based on Nucleotide's Ring Structure [0.03%]
基于核苷酸环状结构的有效DNA序列可视化编码方法研究
A T M Golam Bari,Mst Rokeya Reaz,A K M Tauhidul Islam et al.
A T M Golam Bari et al.
Effective representation of DNA sequences is one of the important tasks in the study of genome sequences. In this paper, we propose a graphical representation of DNA sequences based on nucleotide ring structure. In the proposed representati...
Molecular evolution and functional divergence of soluble starch synthase genes in cassava (manihot esculenta crantz) [0.03%]
木薯可溶性淀粉合成酶基因的分子进化及功能分化研究
Zefeng Yang,Yifan Wang,Shuhui Xu et al.
Zefeng Yang et al.
Soluble starch synthases (SSs) are major enzymes involved in starch biosynthesis in plants. Cassava starch has many remarkable characteristics, which should be influenced by the evolution of SS genes in this starchy root crop. In this work,...
rbrothers: R Package for Bayesian Multiple Change-Point Recombination Detection [0.03%]
rbrothers：一种用于贝叶斯多重变点重组检测的R包
Jan Irvahn,Sujay Chattopadhyay,Evgeni V Sokurenko et al.
Jan Irvahn et al.
Phylogenetic recombination detection is a fundamental task in bioinformatics and evolutionary biology. Most of the computational tools developed to attack this important problem are not integrated into the growing suite of R packages for st...
Comment on "The Molecular Evolutionary Patterns of the Insulin/FOXO Signaling Pathway" [0.03%]
关于“胰岛素/FOXO信号通路的分子进化模式”的评论
David Alvarez-Ponce,Montserrat Aguadé,Julio Rozas
David Alvarez-Ponce
Letter to the Editor on Wang M, Wang Q, Wang Z, Zhang X, Pan Y. The molecular evolutionary patterns of the insulin/FOXO signaling pathway. Evol Bioinform. 2013;9:1-16. doi: 10.4137/EBO.S10539. ...
Analysis of synonymous codon usage patterns in seven different citrus species [0.03%]
七种柑橘属物种的同义密码子使用模式分析
Chen Xu,Jing Dong,Chunfa Tong et al.
Chen Xu et al.
We used large samples of expressed sequence tags to characterize the patterns of codon usage bias (CUB) in seven different Citrus species and to analyze their evolutionary effect on selection and base composition. We found that A- and T-end...
Antiviral Stratagems Against HIV-1 Using RNA Interference (RNAi) Technology [0.03%]
利用RNA干扰技术针对HIV-1的抗病毒策略
Dimitrios Vlachakis,Georgia Tsiliki,Athanasia Pavlopoulou et al.
Dimitrios Vlachakis et al.
The versatility of human immunodeficiency virus (HIV)-1 and its evolutionary potential to elude antiretroviral agents by mutating may be its most invincible weapon. Viruses, including HIV, in order to adapt and survive in their environment ...
Eduardo P Costa,Celine Vens,Hendrik Blockeel
Eduardo P Costa
We propose a novel method for the task of protein subfamily identification; that is, finding subgroups of functionally closely related sequences within a protein family. In line with phylogenomic analysis, the method first builds a hierarch...
A Tool Preference Choice Method for RNA Secondary Structure Prediction by SVM with Statistical Tests [0.03%]
基于统计检验的SVM核函数选择方法及在RNA二级结构预测中的应用
Chiou-Yi Hor,Chang-Biau Yang,Chia-Hung Chang et al.
Chiou-Yi Hor et al.
The Prediction of RNA secondary structures has drawn much attention from both biologists and computer scientists. Many useful tools have been developed for this purpose. These tools have their individual strengths and weaknesses. As a resul...
Circulation of human respiratory syncytial virus strains among hospitalized children with acute lower respiratory infection in malaysia [0.03%]
马来西亚住院急性下呼吸道感染儿童中的人类副流感病毒的流行情况分析
Mohammad Reza Etemadi,Zamberi Sekawi,Norlijah Othman et al.
Mohammad Reza Etemadi et al.
Human respiratory syncytial virus (RSV) is a major viral pathogen associated with acute lower respiratory tract infections (ALRTIs) among hospitalized children. In this study, the genetic diversity of the RSV strains was investigated among ...
Peter J Becich,Brian P Stark,Harish S Bhat et al.
Peter J Becich et al.
Code-message coevolution (CMC) models represent coevolution of a genetic code and a population of protein-coding genes ("messages"). Formally, CMC models are sets of quasispecies coupled together for fitness through a shared genetic code. A...