An In-depth Analysis of a Multilocus Phylogeny Identifies leuS As a Reliable Phylogenetic Marker for the Genus Pantoea [0.03%]
基于多基因位点的系统发育分析鉴定出leuS可作为植物病原菌潘托埃氏菌属的分子标记基因
James T Tambong,Renlin Xu,Cynthia-Anne Kaneza et al.
James T Tambong et al.
Partial sequences of six core genes (fusA, gyrB, leuS, pyrG, rlpB, and rpoB) of 37 strains of Pantoea species were analyzed in order to obtain a comprehensive view regarding the phylogenetic relationships within the Pantoea genus and compar...
Maria Needhamsen,Robert B White,Keith M Giles et al.
Maria Needhamsen et al.
The paired box gene 6 (PAX6) is a powerful mediator of eye and brain organogenesis whose spatiotemporal expression is exquisitely controlled by multiple mechanisms, including post-transcriptional regulation by microRNAs (miRNAs). In the pre...
Influence of modularity and regularity on disparity of atelostomata sea urchins [0.03%]
模块性和规则性对真海胆属不平等度的影响
Juan López-Sauceda,Juan Malda-Barrera,Alfredo Laguarda-Figueras et al.
Juan López-Sauceda et al.
A modularity approach is used to study disparity rates and evolvability of sea urchins belonging to the Atelostomata superorder. For this purpose, the pentameric sea urchin architecture is partitioned into modular spatial components and the...
Similarity/Dissimilarity analysis of protein sequences based on a new spectrum-like graphical representation [0.03%]
基于新的类似谱图的图形表示法的蛋白质序列相似性/非相似性分析方法研究
Yuhua Yao,Shoujiang Yan,Huimin Xu et al.
Yuhua Yao et al.
Sequence comparison is one of the foundations in bioinformatics, which can be used to study evolutionary relations among the sequences. In this study, a 2D spectrum-like graphical representation of protein sequences is presented based on th...
Assignment of Calibration Information to Deeper Phylogenetic Nodes is More Effective in Obtaining Precise and Accurate Divergence Time Estimates [0.03%]
较深节点的校准信息分配有助于获得更精确准确的分化时间估计值
Beatriz Mello,Carlos G Schrago
Beatriz Mello
Divergence time estimation has become an essential tool for understanding macroevolutionary events. Molecular dating aims to obtain reliable inferences, which, within a statistical framework, means jointly increasing the accuracy and precis...
A multistep screening method to identify genes using evolutionary transcriptome of plants [0.03%]
利用植物进化转录组进行基因识别的多步筛选方法
Chang-Kug Kim,Hye-Min Lim,Jong-Kuk Na et al.
Chang-Kug Kim et al.
We introduced a multistep screening method to identify the genes in plants using microarrays and ribonucleic acid (RNA)-seq transcriptome data. Our method describes the process for identifying genes using the salt-tolerance response pathway...
TreSpEx-Detection of Misleading Signal in Phylogenetic Reconstructions Based on Tree Information [0.03%]
基于树信息的系统发生重建中误导信号检测的TreSpEx方法
Torsten H Struck
Torsten H Struck
Phylogenies of species or genes are commonplace nowadays in many areas of comparative biological studies. However, for phylogenetic reconstructions one must refer to artificial signals such as paralogy, long-branch attraction, saturation, o...
Plamen Stoyanov,Dzhemal Moten,Rumen Mladenov et al.
Plamen Stoyanov et al.
The polyphasic approach is the most progressive system that has been suggested for distinguishing and phylogenetically classifying Cyanoprokaryota (Cyanobacteria/Cyanophyta). Several oscillatorialean genera (Lyngbya, Phormidium, Plectonema,...
The stochastic evolutionary game for a population of biological networks under natural selection [0.03%]
自然选择下生物网络群体的随机演化博弈研究
Bor-Sen Chen,Shih-Ju Ho
Bor-Sen Chen
In this study, a population of evolutionary biological networks is described by a stochastic dynamic system with intrinsic random parameter fluctuations due to genetic variations and external disturbances caused by environmental changes in ...
Dongming Tang,Mingwen Wang,Weifan Zheng et al.
Dongming Tang et al.
To discover relationships and associations rapidly in large-scale datasets, we propose a cross-platform tool for the rapid computation of the maximal information coefficient based on parallel computing methods. Through parallel processing, ...