Phylogenomic and population genomic analyses reveal the spatial-temporal dynamics of diversification of the Nigella arvensis complex (Ranunculaceae) in the Aegean archipelago [0.03%]
基于基因组的系统发育和群体遗传分析揭示了爱琴海群岛天蓝雪莲复合体的空间-时间分化动态
Jinjing Jian,Yi Yuan,Roser Vilatersana et al.
Jinjing Jian et al.
The continental-shelf islands of the Aegean Sea provide an ideal geographical setting for evolutionary-biogeographical studies but disentangling the relationships between palaeogeographical history and the times, orders of modes of taxon di...
ModelRevelator: Fast phylogenetic model estimation via deep learning [0.03%]
模型揭示者：基于深度学习的快速系统发育模型估算
Sebastian Burgstaller-Muehlbacher,Stephen M Crotty,Heiko A Schmidt et al.
Sebastian Burgstaller-Muehlbacher et al.
Selecting the best model of sequence evolution for a multiple-sequence-alignment (MSA) constitutes the first step of phylogenetic tree reconstruction. Common approaches for inferring nucleotide models typically apply maximum likelihood (ML)...
Hiker, a new family of DNA transposons encoding transposases with DD35E motifs, displays a distinct phylogenetic relationship with most known DNA transposon families of IS630-Tc1-mariner (ITm) [0.03%]
一个新的家族的DNA转座子(Hiker)，编码含有DD35E模件的转座酶，与大多数已知的IS630-Tc1-长距走动基因-mariner(DNA)转座子超家族没有发生直系进化关系
Shasha Shi,Mikhail V Puzakov,Ludmila V Puzakova et al.
Shasha Shi et al.
DNA transposons play a crucial role in determining the size and structure of eukaryotic genomes. In this study, a new family of IS630-Tc1-mariner (ITm) DNA transposons, named Hiker (HK), was identified. HK is characterized by a DD35E cataly...
Shift in symbiotic lifestyle as the major process shaping the evolution of pea crabs (Decapoda: Brachyura: Pinnotheroidea) [0.03%]
共生生活方式的转变是豌豆蟹（十足目：短尾亚目：Pinnotheroidea）进化的主要驱动力
Lai Him Chow,Shane T Ahyong,Chandler T T Tsang et al.
Lai Him Chow et al.
The pea crabs, superfamily Pinnotheroidea, are exceptional among brachyuran crabs in their diverse symbiotic associations involving both inquilinism and protective symbiosis. While this group presents a rare opportunity for evolutionary com...
Whole-genome sequencing-based analysis of antimicrobial resistance, virulence factors, and genetic diversity in Yersinia isolated in Wenzhou, China 2020 [0.03%]
基于全基因组测序的耐药性、毒力因子及温州耶尔森菌遗传多样性分析
Shaojie Huang,Yi Li,Chengji Hong et al.
Shaojie Huang et al.
Yersinia spp. vary significantly in their ability to cause diseases that threaten public health. Their pathogenicity is frequently associated with increasing antimicrobial resistance (AMR) and various virulence factors. The aim of the study...
Genomic evidence sheds new light on phylogeny of Rhabdophis nuchalis (sensu lato) complex (Serpentes: Natricidae) [0.03%]
基因组证据揭示了广义红颈链蛇(Rhabdophis nuchalis)复合体的系统发育关系（有鳞目：腹足亚科）
Qin Liu,Bing Lyu,Xinhong Xie et al.
Qin Liu et al.
Stable taxonomy and robust phylogeny are essential for the evolution and conservation of organisms. The Rhabdophis nuchalis (sensu lato) complex presently contains three species (R. nuchalis, R. chiwen, R. pentasupralabialis). Although seve...
Interspecific gene flow obscures phylogenetic relationships in an important insect pest species complex [0.03%]
种间基因流模糊了重要昆虫害虫复合体的系统发育关系
Michael San Jose,Camiel Doorenweerd,Scott Geib et al.
Michael San Jose et al.
As genomic data proliferates, the prevalence of post-speciation gene flow is making species boundaries and relationships increasingly ambiguous. Although current approaches inferring fully bifurcating phylogenies based on concatenated datas...
Ultraconserved elements resolve phylogenetic relationships and biogeographic history of African-Malagasy bent-winged bats (Miniopterus) [0.03%]
超保守元件解析非洲-马达加斯加弯翼蝙蝠（Miniopterus）的谱系关系和生物地理历史
Terrence C Demos,Paul W Webala,Steven M Goodman et al.
Terrence C Demos et al.
African-Malagasy species of the bat genus Miniopterus are notable both for the dramatic increase in the number of newly recognized species over the last 15 years, as well as for the profusion of new taxa from Madagascar and the neighboring ...
Phylogenetic discordance and integrative species delimitation in the Mammillaria haageana species complex (Cactaceae) [0.03%]
Mammillaria haageana 复杂物种划分的谱系分歧及综合种的界定（仙人掌科）
Cristian R Cervantes,José-Rubén Montes,Ulises Rosas et al.
Cristian R Cervantes et al.
Species complexes consist of very close phylogenetic relatives, where morphological similarities make it difficult to distinguish between them using traditional taxonomic methods. Here, we focused on the long-standing challenge of species d...
Corrigendum to "Species delimitation using genomic data to resolve taxonomic uncertainties in a speciation continuum of pelagic seabirds" [Mol. Phylogenet. Evol. 179 (2023) 107671] [0.03%]
关于“利用基因组数据解决pelagic海鸟(speciation continuum)分类不确定性的物种界定”的勘误(分子系统发生与进化第179卷(2023)107671号论文)
Joan Ferrer Obiol,Jose M Herranz,Josephine R Paris et al.
Joan Ferrer Obiol et al.
Published Erratum
Molecular phylogenetics and evolution. 2023 Oct:187:107888. DOI:10.1016/j.ympev.2023.107888 2023