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Genes. 2020 Nov 24;11(12):1390. doi: 10.3390/genes11121390 Q22.82024

Bracon brevicornis Genome Showcases the Potential of Linked-Read Sequencing in Identifying a Putative Complementary Sex Determiner Gene

Bracon brevicornis基因组展示了链读测序在鉴定假定的互补性别决定基因方面的潜力 翻译改进

Kim B Ferguson  1, Bart A Pannebakker  1, Alejandra Centurión  2, Joost van den Heuvel  1, Ronald Nieuwenhuis  3, Frank F M Becker  1, Elio Schijlen  3, Andra Thiel  2, Bas J Zwaan  1, Eveline C Verhulst  4

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作者单位

  • 1 Laboratory of Genetics, Wageningen University & Research, 6708PB Wageningen, The Netherlands.
  • 2 Population and Evolutionary Ecology Group, Institute of Ecology, FB02, University of Bremen, 28359 Bremen, Germany.
  • 3 Bioscience, Wageningen University & Research, 6708PB Wageningen, The Netherlands.
  • 4 Laboratory of Entomology, Wageningen University & Research, 6708PB Wageningen, The Netherlands.
  • DOI: 10.3390/genes11121390 PMID: 33255162

    摘要 Ai翻译

    Bracon brevicornis is an ectoparasitoid of a wide range of larval-stage Lepidopterans, including several pests of important crops, such as the corn borer, Ostrinia nubilalis. It is also one of the earliest documented cases of complementary sex determination in Hymenoptera. Here, we present the linked-read-based genome of B. brevicornis, complete with an ab initio-derived annotation and protein comparisons with fellow braconids, Fopius arisanus and Diachasma alloeum. We demonstrate the potential of linked-read assemblies in exploring regions of heterozygosity and search for structural and homology-derived evidence of the complementary sex determiner gene (csd).

    Keywords: 10X Genomics; Braconinae; complementary sex determination; feminizer; microsynteny; parasitic wasp; parasitoid.

    Keywords:linked-read sequencing; Bracon brevicornis genome

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    期刊名:Genes

    缩写:GENES-BASEL

    ISSN:2073-4425

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    IF/分区:2.8/Q2

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    Bracon brevicornis Genome Showcases the Potential of Linked-Read Sequencing in Identifying a Putative Complementary Sex Determiner Gene