alignparse: A Python package for parsing complex features from high-throughput long-read sequencing [0.03%]
AlignParse：一个用于从高通量长读测序中解析复杂特征的Python包
Katharine H D Crawford,Jesse D Bloom
Katharine H D Crawford
Advances in sequencing technology have made it possible to generate large numbers of long, high-accuracy sequencing reads. For instance, the new PacBio Sequel platform can generate hundreds of thousands of high-quality circular consensus se...
Pádraig T Looney,Gordon N Stevenson,Sally L Collins
Pádraig T Looney
The Kretzfile format is used to store 3D ultrasound data, from GE Voluson ultrasound scanners. The geometry used in these hies is a toroidal coordinate system. Cartesian coordinates are required to allow application of advanced image librar...
GFAKluge: A C++ library and command line utilities for the Graphical Fragment Assembly formats [0.03%]
GFA Kluge：用于图形片段装配格式的C++库和命令行工具
Eric T Dawson,Richard Durbin
Eric T Dawson
Summary: GFA has emerged as a standard format for the exchange of genome assemblies and sequence graphs. To encourage further adoption in high-performance software we have developed an open-source C++ library for GFA and ...
diff_classifier: Parallelization of multi-particle tracking video analyses [0.03%]
差分分类器：多粒子追踪视频分析的并行计算
Chad Curtis,Ariel Rokem,Elizabeth Nance
Chad Curtis
The diff_classifier package seeks to address the issue of scale-up in multi-particle tracking (MPT) analyses via a parallelization approach. MPT is a powerful analytical tool that has been used in fields ranging from aeronautics to oceanogr...
xml2jupyter: Mapping parameters between XML and Jupyter widgets [0.03%]
XML2Jupyter：在XML和Jupyter小部件之间映射参数
Randy Heiland,Daniel Mishler,Tyler Zhang et al.
Randy Heiland et al.
Jupyter Notebooks (Kluyver et al., 2016, Perkel (2018)) provide executable documents (in a variety of programming languages) that can be run in a web browser. When a notebook contains graphical widgets, it becomes an easy-to-use graphical u...
Genotify: Fast, lightweight gene lookup and summarization [0.03%]
基因查询和摘要工具Genotify：快速、轻量级的基因查找和汇总工具
Jared M Andrews,Mohamed El-Alawi,Jacqueline E Payton
Jared M Andrews
PFEIFER: Preprocessing Framework for Electrograms Intermittently Fiducialized from Experimental Recordings [0.03%]
基于实验记录的间歇性特征的心电图预处理框架(PFEIFER)
Anton Rodenhauser,Wilson W Good,Brian Zenger et al.
Anton Rodenhauser et al.
Abhinav Tushar,Nicholas G Reich
Abhinav Tushar