Adeft: Acromine-based Disambiguation of Entities from Text with applications to the biomedical literature [0.03%]
基于Acromine的文本实体消歧及其在生物医学文献中的应用
Albert Steppi,Benjamin M Gyori,John A Bachman
Albert Steppi
Allison M Stettler,Christopher W John,Yegor D Proshlyakov et al.
Allison M Stettler et al.
KinESim: Pre-equilibrium kinetic simulation of electrochemical reactions [0.03%]
KinESim：电化学反应预平衡动力学模拟
Christopher W John,Denis A Proshlyakov
Christopher W John
tsfeaturex: An R Package for Automating Time Series Feature Extraction [0.03%]
TSFEXTRAX：一个自动化时间序列特征提取的R包
Nelson A Roque,Nilam Ram
Nelson A Roque
Bedtoolsr: An R package for genomic data analysis and manipulation [0.03%]
Bedtoolsr：一个用于基因组数据处理和分析的R包
Mayura N Patwardhan,Craig D Wenger,Eric S Davis et al.
Mayura N Patwardhan et al.
The sequencing of the human genome and subsequent advances in DNA sequencing technology have created a need for computational tools to analyze and manipulate genomic data sets. The bedtools software suite and the R programming language have...
Amit Min,Erika Deoudes,Marielle L Bond et al.
Amit Min et al.
Protein phosphatases and kinases play critical roles in a host of biological processes and diseases via the removal and addition of phosphoryl groups. While kinases have been extensively studied for decades, recent findings regarding the sp...
alignparse: A Python package for parsing complex features from high-throughput long-read sequencing [0.03%]
AlignParse：一个用于从高通量长读测序中解析复杂特征的Python包
Katharine H D Crawford,Jesse D Bloom
Katharine H D Crawford
Advances in sequencing technology have made it possible to generate large numbers of long, high-accuracy sequencing reads. For instance, the new PacBio Sequel platform can generate hundreds of thousands of high-quality circular consensus se...
Pádraig T Looney,Gordon N Stevenson,Sally L Collins
Pádraig T Looney
The Kretzfile format is used to store 3D ultrasound data, from GE Voluson ultrasound scanners. The geometry used in these hies is a toroidal coordinate system. Cartesian coordinates are required to allow application of advanced image librar...
GFAKluge: A C++ library and command line utilities for the Graphical Fragment Assembly formats [0.03%]
GFA Kluge：用于图形片段装配格式的C++库和命令行工具
Eric T Dawson,Richard Durbin
Eric T Dawson
Summary: GFA has emerged as a standard format for the exchange of genome assemblies and sequence graphs. To encourage further adoption in high-performance software we have developed an open-source C++ library for GFA and ...
diff_classifier: Parallelization of multi-particle tracking video analyses [0.03%]
差分分类器：多粒子追踪视频分析的并行计算
Chad Curtis,Ariel Rokem,Elizabeth Nance
Chad Curtis
The diff_classifier package seeks to address the issue of scale-up in multi-particle tracking (MPT) analyses via a parallelization approach. MPT is a powerful analytical tool that has been used in fields ranging from aeronautics to oceanogr...