Bacterial degradation of ctenophore Mnemiopsis leidyi organic matter [0.03%]
栉水母Mnemiopsis leidyi有机物的细菌降解过程
Eduard Fadeev,Jennifer H Hennenfeind,Chie Amano et al.
Eduard Fadeev et al.
Blooms of gelatinous zooplankton, an important source of protein-rich biomass in coastal waters, often collapse rapidly, releasing large amounts of labile detrital organic matter (OM) into the surrounding water. Although these blooms have t...
Mitogenomic architecture and evolution of the soil ciliates Colpoda [0.03%]
土壤纤毛虫Colpoda的线粒体基因组结构与进化
Yuanyuan Zhang,Haichao Li,Yaohai Wang et al.
Yuanyuan Zhang et al.
Colpoda are cosmopolitan unicellular eukaryotes primarily inhabiting soil and benefiting plant growth, but they remain one of the least understood taxa in genetics and genomics within the realm of ciliated protozoa. Here, we investigate the...
Metagenomic analysis of the honey bee queen microbiome reveals low bacterial diversity and Caudoviricetes phages [0.03%]
蜜蜂蜂后微生物组的元基因组分析显示了低细菌多样性和Caudoviricetes噬菌体
Lílian Caesar,Danny W Rice,Alison McAfee et al.
Lílian Caesar et al.
In eusocial insects, the health of the queens-the colony founders and sole reproductive females-is a primary determinant for colony success. Queen failure in the honey bee Apis mellifera, for example, is a major concern of beekeepers who an...
Dominant nitrogen metabolisms of a warm, seasonally anoxic freshwater ecosystem revealed using genome resolved metatranscriptomics [0.03%]
温暖的，季节性缺氧的淡水生态系统中主要的氮代谢机制利用基因组解析元转录组学揭示
J M Fadum,M A Borton,R A Daly et al.
J M Fadum et al.
Nitrogen (N) availability is one of the principal drivers of primary productivity across aquatic ecosystems. However, the microbial communities and emergent metabolisms that govern N cycling in tropical lakes are both distinct from and poor...
A benchmark of optimization solvers for genome-scale metabolic modeling of organisms and communities [0.03%]
基因组规模代谢建模的优化求解器基准测试：针对生物体和群落
Daniel Machado
Daniel Machado
Genome-scale metabolic modeling is a powerful framework for predicting metabolic phenotypes of any organism with an annotated genome. For two decades, this framework has been used for the rational design of microbial cell factories. In the ...
Periodontitis aggravates COPD through the activation of γδ T cell and M2 macrophage [0.03%]
牙周炎通过激活γδT细胞和M2巨噬细胞加重慢阻肺
Kaixin Xiong,Keping Ao,Wei Wei et al.
Kaixin Xiong et al.
Chronic obstructive pulmonary disease (COPD) is a chronic systemic inflammatory disease with high morbidity and mortality. Periodontitis exacerbates COPD progression; however, the immune mechanisms by which periodontitis affects COPD remain...
Adaptive laboratory evolution reveals regulators involved in repressing biofilm development as key players in Bacillus subtilis root colonization [0.03%]
适应性实验室进化揭示了抑制生物膜发育的调节因子是Bacillus subtilis根部定植的关键因素
Maude Pomerleau,Vincent Charron-Lamoureux,Lucille Léonard et al.
Maude Pomerleau et al.
Root-associated microorganisms play an important role in plant health, such as plant growth-promoting rhizobacteria (PGPR) from the Bacillus and Pseudomonas genera. Although bacterial consortia including these two genera would represent a p...
KSHV 3.0: a state-of-the-art annotation of the Kaposi's sarcoma-associated herpesvirus transcriptome using cross-platform sequencing [0.03%]
KSHV 3.0：利用跨平台测序对与卡波西肉瘤相关的疱疹病毒转录组进行最新注释
István Prazsák,Dóra Tombácz,Ádám Fülöp et al.
István Prazsák et al.
Kaposi's sarcoma-associated herpesvirus (KSHV) is a large, oncogenic DNA virus belonging to the gammaherpesvirus subfamily. KSHV has been extensively studied with various high-throughput RNA-sequencing approaches to map the transcription st...
Functional metabolomics of the human scalp: a metabolic niche for Staphylococcus epidermidis [0.03%]
人类头皮的功能代谢组学：表皮葡萄球菌的代谢生态位
Louis-Félix Nothias,Robin Schmid,Allison Garlet et al.
Louis-Félix Nothias et al.
Although metabolomics data acquisition and analysis technologies have become increasingly sophisticated over the past 5-10 years, deciphering a metabolite's function from a description of its structure and its abundance in a given experimen...
Predicting the final metabolic profile based on the succession-related microbiota during spontaneous fermentation of the starter for Chinese liquor making [0.03%]
基于起糟代谢 Succession 相关微生物群落预测固态法白酒发酵终末代谢谱
Shibo Ban,Wei Cheng,Xi Wang et al.
Shibo Ban et al.
Microbial inoculation is an effective way to improve the quality of fermented foods via affecting the microbiota structure. However, it is unclear how the inoculation regulates the microbiota structure, and it is still difficult to directio...