Correction: PhenoDEF: a corpus for annotating sentences with information of phenotype definitions in biomedical literature [0.03%]
纠正：PhenoDEF：一个用于注释生物医学文献中表型定义信息句子的语料库
Samar Binkheder,Heng-Yi Wu,Sara K Quinney et al.
Samar Binkheder et al.
Published Erratum
Journal of biomedical semantics. 2022 Jul 20;13(1):20. DOI:10.1186/s13326-022-00275-3 2022
Philip van Damme,Jesualdo Tomás Fernández-Breis,Nirupama Benis et al.
Philip van Damme et al.
Background: Ontology matching should contribute to the interoperability aspect of FAIR data (Findable, Accessible, Interoperable, and Reusable). Multiple data sources can use different ontologies for annotating their data...
Anatomy and the type concept in biology show that ontologies must be adapted to the diagnostic needs of research [0.03%]
解剖学和生物学类型概念表明本体必须适应研究的诊断需求
Lars Vogt,István Mikó,Thomas Bartolomaeus
Lars Vogt
Background: In times of exponential data growth in the life sciences, machine-supported approaches are becoming increasingly important and with them the need for FAIR (Findable, Accessible, Interoperable, Reusable) and eS...
PhenoDEF: a corpus for annotating sentences with information of phenotype definitions in biomedical literature [0.03%]
基于生物医学文献的表型定义信息标注语料库PhenoDEF
Samar Binkheder,Heng-Yi Wu,Sara K Quinney et al.
Samar Binkheder et al.
Background: Adverse events induced by drug-drug interactions are a major concern in the United States. Current research is moving toward using electronic health record (EHR) data, including for adverse drug events discove...
Hoang-Quynh Le,Duy-Cat Can,Nigel Collier
Hoang-Quynh Le
Background: Most previous relation extraction (RE) studies have focused on intra sentence relations and have ignored relations that span sentences, i.e. inter sentence relations. Such relations connect entities at the doc...
Synthesizing evidence from clinical trials with dynamic interactive argument trees [0.03%]
基于动态交互式论据树的临床试验合成证据法
Olivia Sanchez-Graillet,Christian Witte,Frank Grimm et al.
Olivia Sanchez-Graillet et al.
Background: Evidence-based medicine propagates that medical/clinical decisions are made by taking into account high-quality evidence, most notably in the form of randomized clinical trials. Evidence-based decision-making ...
An annotated corpus of clinical trial publications supporting schema-based relational information extraction [0.03%]
支持模式的关系信息抽取的临床试验文献标注语料库
Olivia Sanchez-Graillet,Christian Witte,Frank Grimm et al.
Olivia Sanchez-Graillet et al.
Background: The evidence-based medicine paradigm requires the ability to aggregate and compare outcomes of interventions across different trials. This can be facilitated and partially automatized by information extraction...
SemClinBr - a multi-institutional and multi-specialty semantically annotated corpus for Portuguese clinical NLP tasks [0.03%]
SemClinBr：一个用于葡萄牙语临床自然语言处理任务的多机构、多学科语义注释语料库
Lucas Emanuel Silva E Oliveira,Ana Carolina Peters,Adalniza Moura Pucca da Silva et al.
Lucas Emanuel Silva E Oliveira et al.
Background: The high volume of research focusing on extracting patient information from electronic health records (EHRs) has led to an increase in the demand for annotated corpora, which are a precious resource for both t...
Multicenter Study
Journal of biomedical semantics. 2022 May 8;13(1):13. DOI:10.1186/s13326-022-00269-1 2022
Applying the FAIR principles to data in a hospital: challenges and opportunities in a pandemic [0.03%]
在大流行期间，在医院中应用FAIR原则面对的挑战与机遇
Núria Queralt-Rosinach,Rajaram Kaliyaperumal,César H Bernabé et al.
Núria Queralt-Rosinach et al.
Background: The COVID-19 pandemic has challenged healthcare systems and research worldwide. Data is collected all over the world and needs to be integrated and made available to other researchers quickly. However, the var...
Improving reusability along the data life cycle: a regulatory circuits case study [0.03%]
数据生命周期中的可重用性改进：基于调控回路的案例研究
Marine Louarn,Fabrice Chatonnet,Xavier Garnier et al.
Marine Louarn et al.
Background: In life sciences, there has been a long-standing effort of standardization and integration of reference datasets and databases. Despite these efforts, many studies data are provided using specific and non-stan...