Constructing a knowledge graph for open government data: the case of Nova Scotia disease datasets [0.03%]
用于开放政府数据的本体构建——以Nova Scotia疾病数据集为例
Enayat Rajabi,Rishi Midha,Jairo Francisco de Souza
Enayat Rajabi
The majority of available datasets in open government data are statistical. They are widely published by various governments to be used by the public and data consumers. However, most open government data portals do not provide the five-sta...
The Environmental Conditions, Treatments, and Exposures Ontology (ECTO): connecting toxicology and exposure to human health and beyond [0.03%]
环境条件、治疗和暴露本体（ECTO）：连接毒理学与人类健康暴露及其他方面
Lauren E Chan,Anne E Thessen,William D Duncan et al.
Lauren E Chan et al.
Background: Evaluating the impact of environmental exposures on organism health is a key goal of modern biomedicine and is critically important in an age of greater pollution and chemicals in our environment. Environmenta...
MedLexSp - a medical lexicon for Spanish medical natural language processing [0.03%]
MedLexSp——一种西班牙语医学自然语言处理词典
Leonardo Campillos-Llanos
Leonardo Campillos-Llanos
Background: Medical lexicons enable the natural language processing (NLP) of health texts. Lexicons gather terms and concepts from thesauri and ontologies, and linguistic data for part-of-speech (PoS) tagging, lemmatizati...
Classifying literature mentions of biological pathogens as experimentally studied using natural language processing [0.03%]
基于自然语言处理的生物病原体文献分类研究
Antonio Jose Jimeno Yepes,Karin Verspoor
Antonio Jose Jimeno Yepes
Background: Information pertaining to mechanisms, management and treatment of disease-causing pathogens including viruses and bacteria is readily available from research publications indexed in MEDLINE. However, identifyi...
We are not ready yet: limitations of state-of-the-art disease named entity recognizers [0.03%]
我们尚未准备好：最先进的疾病命名实体识别器的局限性
Lisa Kühnel,Juliane Fluck
Lisa Kühnel
Background: Intense research has been done in the area of biomedical natural language processing. Since the breakthrough of transfer learning-based methods, BERT models are used in a variety of biomedical and clinical app...
A comprehensive update on CIDO: the community-based coronavirus infectious disease ontology [0.03%]
CIDO综述：社区驱动的冠状病毒传染病本体论
Yongqun He,Hong Yu,Anthony Huffman et al.
Yongqun He et al.
Background: The current COVID-19 pandemic and the previous SARS/MERS outbreaks of 2003 and 2012 have resulted in a series of major global public health crises. We argue that in the interest of developing effective and saf...
Benedikt Fh Becker,Jan A Kors,Erik M van Mulligen et al.
Benedikt Fh Becker et al.
Background: Vaccine information in European electronic health record (EHR) databases is represented using various clinical and database-specific coding systems and drug vocabularies. The lack of harmonization constitutes ...
John Grimes,Piotr Szul,Alejandro Metke-Jimenez et al.
John Grimes et al.
Background: Health data analytics is an area that is facing rapid change due to the acceleration of digitization of the health sector, and the changing landscape of health data and clinical terminology standards. Our rese...
Identification of missing hierarchical relations in the vaccine ontology using acquired term pairs [0.03%]
利用获得的术语对识别疫苗本体中缺失的层次化关系
Warren Manuel,Rashmie Abeysinghe,Yongqun He et al.
Warren Manuel et al.
Background: The Vaccine Ontology (VO) is a biomedical ontology that standardizes vaccine annotation. Errors in VO will affect a multitude of applications that it is being used in. Quality assurance of VO is imperative to ...
DCSO: towards an ontology for machine-actionable data management plans [0.03%]
DCSO：迈向机器可执行的数据管理计划本体论
João Cardoso,Leyla J Castro,Fajar J Ekaputra et al.
João Cardoso et al.
The concept of Data Management Plan (DMP) has emerged as a fundamental tool to help researchers through the systematical management of data. The Research Data Alliance DMP Common Standard (DCS) working group developed a set of universal con...