Representing physiological processes and their participants with PhysioMaps [0.03%]
用生理地图（PhysioMaps）表示生理过程及其参与者
Daniel L Cook,Maxwell L Neal,Robert Hoehndorf et al.
Daniel L Cook et al.
Background: As the number and size of biological knowledge resources for physiology grows, researchers need improved tools for searching and integrating knowledge and physiological models. Unfortunately, current resources...
Alison Callahan,José Cruz-Toledo,Michel Dumontier
Alison Callahan
Background: A key activity for life scientists in this post "-omics" age involves searching for and integrating biological data from a multitude of independent databases. However, our ability to find relevant data is hamp...
Selected papers from the 15th Annual Bio-Ontologies Special Interest Group Meeting [0.03%]
第十五届生物本体专题讨论会精选论文集
Larisa N Soldatova,Susanna-Assunta Sansone,Michel Dumontier et al.
Larisa N Soldatova et al.
Over the 15 years, the Bio-Ontologies SIG at ISMB has provided a forum for discussion of the latest and most innovative research in the bio-ontologies development, its applications to biomedicine and more generally the organisation, present...
Patricia L Whetzel;NCBO Team
Patricia L Whetzel;NCBO Team
As new biomedical technologies are developed, the amount of publically available biomedical data continues to increase. To help manage these vast and disparate data sources, researchers have turned to the Semantic Web. Specifically, ontolog...
Larisa N Soldatova,Andrey Rzhetsky,Kurt De Grave et al.
Larisa N Soldatova et al.
The theory of probability is widely used in biomedical research for data analysis and modelling. In previous work the probabilities of the research hypotheses have been recorded as experimental metadata. The ontology HELO is designed to sup...
Query enhancement through the practical application of ontology: the IEDB and OBI [0.03%]
通过本体的实际应用进行查询增强：免疫表位数据库和实验本体
Randi Vita,James A Overton,Jason A Greenbaum et al.
Randi Vita et al.
Ontologies categorize entities, express relationships between them, and provide standardized definitions. Thus, they can be used to present and enforce the specific relationships between database components. The Immune Epitope Database (IED...
Biotea: RDFizing PubMed Central in support for the paper as an interface to the Web of Data [0.03%]
生物信息学中的Biotea：通过PubMed Central支持论文作为Web数据的界面
L Jael Garcia Castro,C McLaughlin,A Garcia
L Jael Garcia Castro
Background: The World Wide Web has become a dissemination platform for scientific and non-scientific publications. However, most of the information remains locked up in discrete documents that are not always interconnecte...
Erik L Clarke,Salvatore Loguercio,Benjamin M Good et al.
Erik L Clarke et al.
Background: The Gene Ontology and its associated annotations are critical tools for interpreting lists of genes. Here, we introduce a method for evaluating the Gene Ontology annotations and structure based on the impact t...
Automated Patent Categorization and Guided Patent Search using IPC as Inspired by MeSH and PubMed [0.03%]
基于MeSH和PubMed的IPC启发的专利分类和引导式搜索方法研究
Daniel Eisinger,George Tsatsaronis,Markus Bundschus et al.
Daniel Eisinger et al.
Document search on PubMed, the pre-eminent database for biomedical literature, relies on the annotation of its documents with relevant terms from the Medical Subject Headings ontology (MeSH) for improving recall through query expansion. Pat...
BioUSeR: a semantic-based tool for retrieving Life Science web resources driven by text-rich user requirements [0.03%]
BioUSeR：一种基于语义的工具，可根据富含文本的用户需求检索生命科学网络资源
María Pérez,Rafael Berlanga,Ismael Sanz et al.
María Pérez et al.
Background: Open metadata registries are a fundamental tool for researchers in the Life Sciences trying to locate resources. While most current registries assume that resources are annotated with well-structured metadata,...