The clinical measurement, measurement method and experimental condition ontologies: expansion, improvements and new applications [0.03%]
临床测量、测量方法和实验条件本体的扩展、改进及新应用
Jennifer R Smith,Carissa A Park,Rajni Nigam et al.
Jennifer R Smith et al.
Background: The Clinical Measurement Ontology (CMO), Measurement Method Ontology (MMO), and Experimental Condition Ontology (XCO) were originally developed at the Rat Genome Database (RGD) to standardize quantitative rat ...
Georg Fuellen,Ludger Jansen,Ulf Leser et al.
Georg Fuellen et al.
Background: Understanding, modelling and influencing the transition between different states of cells, be it reprogramming of somatic cells to pluripotency or trans-differentiation between cells, is a hot topic in current...
The Gene Ontology (GO) Cellular Component Ontology: integration with SAO (Subcellular Anatomy Ontology) and other recent developments [0.03%]
基因本体(GO)细胞组分本体与SAO(亚细胞解剖学本体)及其他最新动态的整合
Paola Roncaglia,Maryann E Martone,David P Hill et al.
Paola Roncaglia et al.
Background: The Gene Ontology (GO) (http://www.geneontology.org/) contains a set of terms for describing the activity and actions of gene products across all kingdoms of life. Each of these activities is executed in a loc...
OWL model of clinical trial eligibility criteria compatible with partially-known information [0.03%]
兼容部分已知信息的临床试验入组标准的 owl 模型
Olivier Dameron,Paolo Besana,Oussama Zekri et al.
Olivier Dameron et al.
Background: Clinical trials are important for patients, for researchers and for companies. One of the major bottlenecks is patient recruitment. This task requires the matching of a large volume of information about the pa...
Pantelis Topalis,Elvira Mitraka,Vicky Dritsou et al.
Pantelis Topalis et al.
Background: With about half a billion cases, of which nearly one million fatal ones, malaria constitutes one of the major infectious diseases worldwide. A recently revived effort to eliminate the disease also focuses on I...
Dietrich Rebholz-Schuhmann,Senay Kafkas,Jee-Hyub Kim et al.
Dietrich Rebholz-Schuhmann et al.
Background: Named entity recognition (NER) is an essential step in automatic text processing pipelines. A number of solutions have been presented and evaluated against gold standard corpora (GSC). The benchmarking against...
Paul N Schofield,John P Sundberg,Beth A Sundberg et al.
Paul N Schofield et al.
Background: The capture and use of disease-related anatomic pathology data for both model organism phenotyping and human clinical practice requires a relatively simple nomenclature and coding system that can be integrated...
EMAP/EMAPA ontology of mouse developmental anatomy: 2013 update [0.03%]
小鼠发育解剖的EMAP / EMAPA本体论：2013年更新版
Terry F Hayamizu,Michael N Wicks,Duncan R Davidson et al.
Terry F Hayamizu et al.
Background: The Edinburgh Mouse Atlas Project (EMAP) ontology of mouse developmental anatomy provides a standard nomenclature for describing normal and mutant mouse embryo anatomy. The ontology forms the core of the EMAP ...
A semantic-based method for extracting concept definitions from scientific publications: evaluation in the autism phenotype domain [0.03%]
一种基于语义从科学文献中提取自闭症表型领域概念定义的方法及评价
Saeed Hassanpour,Martin J O&#x;Connor,Amar K Das
Saeed Hassanpour
Background: A variety of informatics approaches have been developed that use information retrieval, NLP and text-mining techniques to identify biomedical concepts and relations within scientific publications or their sent...
The Vertebrate Trait Ontology: a controlled vocabulary for the annotation of trait data across species [0.03%]
脊椎动物特征本体：跨物种标注特征数据的受控词汇表
Carissa A Park,Susan M Bello,Cynthia L Smith et al.
Carissa A Park et al.
Background: The use of ontologies to standardize biological data and facilitate comparisons among datasets has steadily grown as the complexity and amount of available data have increased. Despite the numerous ontologies ...