Lars Vogt
Lars Vogt
Background: Currently, almost all morphological data are published as unstructured free text descriptions. This not only brings about terminological problems regarding semantic transparency, which hampers their re-use by ...
Lucy Lu Wang,G Thomas Hayman,Jennifer R Smith et al.
Lucy Lu Wang et al.
Background: To improve the outcomes of biological pathway analysis, a better way of integrating pathway data is needed. Ontologies can be used to organize data from disparate sources, and we leverage the Pathway Ontology ...
John Aberdeen,Samuel Bayer,Cheryl Clark et al.
John Aberdeen et al.
Background: We introduce TranScriptML, a semantic representation schema for prescription regimens allowing various properties of prescriptions (e.g. dose, frequency, route) to be specified separately and applied (manually...
Ontology-based specification and generation of search queries for post-market surveillance [0.03%]
基于本体的市场监督搜索查询规范与生成方法研究
Alexandr Uciteli,Stefan Kropf,Timo Weiland et al.
Alexandr Uciteli et al.
Background: The vigilant observation of medical devices during post-market surveillance (PMS) for identifying safety-relevant incidents is a non-trivial task. A wide range of sources has to be monitored in order to integr...
Oscar Lithgow-Serrano,Socorro Gama-Castro,Cecilia Ishida-Gutiérrez et al.
Oscar Lithgow-Serrano et al.
Background: The ability to express the same meaning in different ways is a well-known property of natural language. This amazing property is the source of major difficulties in natural language processing. Given the const...
Integrating terminologies into standard SQL: a new approach for research on routine data [0.03%]
术语在标准SQL中的集成：基于常规数据研究的新方法
André Sander,Roland Wauer
André Sander
Background: Most electronic medical records still contain large amounts of free-text data. Semantic evaluation of such data requires the data to be encoded with sufficient classifications or transformed into a knowledge-b...
Moonstone: a novel natural language processing system for inferring social risk from clinical narratives [0.03%]
月长石：一种用于从临床叙述中推断社会风险的新型自然语言处理系统
Mike Conway,Salomeh Keyhani,Lee Christensen et al.
Mike Conway et al.
Background: Social risk factors are important dimensions of health and are linked to access to care, quality of life, health outcomes and life expectancy. However, in the Electronic Health Record, data related to many soc...
Seeing the whole picture: integrated pre-surgery reports with PreOptique [0.03%]
全面了解：使用PreOptique进行术前报告集成
Guillermo Vega-Gorgojo,Laura Slaughter,Martin Giese
Guillermo Vega-Gorgojo
Background: Information technology has transformed the way healthcare is conducted. There is a deluge of patient data dispersed in different systems that are commonly not interoperable. As a result, access to patient data...
Levels and building blocks-toward a domain granularity framework for the life sciences [0.03%]
层次和构建模块——生命科学领域颗粒度框架的建立之路
Lars Vogt
Lars Vogt
Background: With the emergence of high-throughput technologies, Big Data and eScience, the use of online data repositories and the establishment of new data standards that require data to be computer-parsable become incre...
A neural classification method for supporting the creation of BioVerbNet [0.03%]
一种支持BioVerbNet构建的神经分类方法
Billy Chiu,Olga Majewska,Sampo Pyysalo et al.
Billy Chiu et al.
Background: VerbNet, an extensive computational verb lexicon for English, has proved useful for supporting a wide range of Natural Language Processing tasks requiring information about the behaviour and meaning of verbs. ...