High-quality RNA extraction from copepods for Next Generation Sequencing: A comparative study [0.03%]
高质量的桡足类RNA提取方法比较研究用于下一代测序技术
Sneha Asai,Adrianna Ianora,Chiara Lauritano et al.
Sneha Asai et al.
Despite the ecological importance of copepods, few Next Generation Sequencing studies (NGS) have been performed on small crustaceans, and a standard method for RNA extraction is lacking. In this study, we compared three commonly-used method...
Transcriptomic response of the hydrothermal mussel Bathymodiolus azoricus in experimental exposure to heavy metals is modulated by the Pgm genotype and symbiont content [0.03%]
模式生物Bathymodiolus azoricus对重金属暴露的转录组响应受到Pgm基因型和内共生体含量的影响
Marion Bougerol,Isabelle Boutet,Dominique LeGuen et al.
Marion Bougerol et al.
Hydrothermal vent mussels belonging to the genus Bathymodiolus dominate communities at hydrothermal sites of the Mid-Atlantic Ridge. The mussel Bathymodiolus azoricus harbors thiotrophic and methanotrophic symbiotic bacteria in its gills an...
Draft genome sequence of Pseudomonas oleovorans strain MGY01 isolated from deep sea water [0.03%]
来源于深海的假单胞菌Pseudomonas oleovorans菌株MGY01基因组草图序列草案
Runping Wang,Chong Ren,Nan Huang et al.
Runping Wang et al.
Pseudomonas oleovorans MGY01 isolated from the deep-sea water of the South China Sea could effectively degrade malachite green. The draft genome of P. oleovorans MGY01 was sequenced and analyzed to gain insights into its efficient metabolic...
Draft genome sequence of an agar-degrading marine bacterium Flammeovirga pacifica WPAGA1 [0.03%]
嗜agar海洋菌Flammeovirga pacifica WPAGA1基因组草图序列
Zhuhua Chan,Runping Wang,Shenglong Liu et al.
Zhuhua Chan et al.
Flammeovirga pacifica WPAGA1(T), which was isolated from sediment of the west Pacific Ocean in 2009 has the ability to produce agar-oligosaccharides from Gracilaria lemaneiformis directly by enzyme-degradation. The draft genome sequence of ...
Transcriptome characterization of the ascidian Pyura chilensis using 454-pyrosequencing data from two distant localities on the southeast Pacific [0.03%]
基于东南太平洋两个远距离栖息地的454-焦磷酸测序数据分析的Pyura chilensis刺胞组学特征
Pilar A Haye,Cristian Gallardo-Escárate
Pilar A Haye
This study describes the results from transcriptomes sequenced by 454-pyrosequencing from two populations separated by 10° of latitude of the endemic tunicate Pyura chilensis. Most transcripts were assembled in 43,972 contigs with an avera...
The complete mitochondrial genome sequence of the network pipefish (Corythoichthys flavofasciatus) and the analyses of phylogenetic relationships within the Syngnathidae species [0.03%]
网络管鱼（Corythoichthys flavofasciatus）线粒体基因组完整序列及其在Sygnathidae科鱼类中的系统发育关系分析
Huixian Zhang,Yanhong Zhang,Geng Qin et al.
Huixian Zhang et al.
This study determined the mitochondrial genome sequence of the network pipefish (Corythoichthys flavofasciatus) (Gasterosteiformes: Syngnathidae). The mitogenome was a circular molecule consisting of 16,961 nucleotides, including 13 protein...
Exploring cyanobacterial genomes for natural product biosynthesis pathways [0.03%]
探究 Cyanobacteria 基因组中的次生代谢途径
Melinda L Micallef,Paul M D&#x;Agostino,Bakir Al-Sinawi et al.
Melinda L Micallef et al.
Cyanobacteria produce a vast array of natural products, some of which are toxic to human health, while others possess potential pharmaceutical activities. Genome mining enables the identification and characterisation of natural product gene...
Comparison of whole mitochondrial genome sequences from two clades of the invasive ascidian, Didemnum vexillum [0.03%]
两种入侵性尾触亚纲动物Didemnum vexillum线粒体基因组全序列的比较分析
Kirsty F Smith,Cathryn L Abbott,Yasunori Saito et al.
Kirsty F Smith et al.
The mitochondria are the main source of cellular energy production and have an important role in development, fertility, and thermal limitations. Adaptive mitochondrial DNA mutations have the potential to be of great importance in determini...
Comparative Study
Marine genomics. 2015 Feb:19:75-83. DOI:10.1016/j.margen.2014.11.007 2015
Identification and expression of antioxidant and immune defense genes in the surf clam Mesodesma donacium challenged with Vibrio anguillarum [0.03%]
受到维氏弧菌胁迫的糙齿扁魁鳚体内的抗氧化和免疫防御基因的鉴定及表达研究
W Maldonado-Aguayo,F Lafarga-De la Cruz,C Gallardo-Escárate
W Maldonado-Aguayo
The immune system in marine invertebrates is mediated through cellular and humoral components, which act together to address the action of potential pathogenic microorganisms. In bivalve mollusks biomolecules implicated in oxidative stress ...
Investigation of mercury tolerance in Chromohalobacter israelensis DSM 6768T and Halomonas zincidurans B6T by comparative genomics with Halomonas xinjiangensis TRM 0175T [0.03%]
通过与盐泽红杆菌TRM 0175T的比较基因组学研究盐泽色杆菌DSM 6768T和Halomonas zincidurans B6T中的甲基汞耐药性
Peng Zhou,Ying-Yi Huo,Lin Xu et al.
Peng Zhou et al.
Chromohalobacter israelensis DSM 6768(T), Halomonas zincidurans B6(T), and Halomonas xinjiangensis TRM 0175(T) are three phylogenetically close strains belonging to the class Gammaproteobacteria. Both strains DSM 6768(T) and B6(T) can grow ...
Comparative Study
Marine genomics. 2015 Feb:19:15-6. DOI:10.1016/j.margen.2014.11.008 2015