Comprehensive computational analysis of leucine-rich repeat (LRR) proteins encoded in the genome of the diatom Phaeodactylum tricornutum [0.03%]
三角褐指藻基因组中富亮氨酸重复（LRR）蛋白的全面计算分析
Birgit Schulze,Matthias T Buhmann,Carolina Río Bártulos et al.
Birgit Schulze et al.
We have screened the genome of the marine diatom Phaeodactylum tricornutum for gene models encoding proteins exhibiting leucine-rich repeat (LRR) structures. In order to reveal the functionality of these proteins, their amino acid sequences...
Phylogenomic analysis of Emiliania huxleyi provides evidence for haptophyte-stramenopile association and a chimeric haptophyte nuclear genome [0.03%]
基于艾氏海洋硅藻的系统基因组学分析发现滑鞭毛虫和顶鞭藻之间存在关联并揭示了滑鞭毛虫核基因组中存在嵌合现象
John J Miller,Charles F Delwiche
John J Miller
Emiliania huxleyi is a haptophyte alga of uncertain phylogenetic affinity containing a secondarily derived, chlorophyll c containing plastid. We sought to characterize its relationships with other taxa by quantifying the bipartitions in whi...
The complete mitochondrial genomes of Umalia orientalis and Lyreidus brevifrons: The phylogenetic position of the family Raninidae within Brachyuran crabs [0.03%]
东方口蛤和简拟口蛤的线粒体基因组及其科 Raninidae 在短尾藻类中的系统进化地位
Guohui Shi,Zhaoxia Cui,Min Hui et al.
Guohui Shi et al.
The complete mitochondrial genome (mitogenome) sequences of two primitive crabs, Umalia orientalis and Lyreidus brevifrons (Decapoda: Brachyura: Raninidae) were determined. The mitogenomes of the two species are 15,466 and 16,112bp in lengt...
Ovary transcriptome profiling of Coilia nasus during spawning migration stages by Illumina sequencing [0.03%]
基于illumina测序的半滑舌鳎(Coilia nasus)生殖洄游阶段卵巢转录组分析
Jin-Rong Duan,Yan-Feng Zhou,Dong-Po Xu et al.
Jin-Rong Duan et al.
Coilia nasus is an anadromous kind of small to moderate size fish species, and limited transcriptomics research has been performed. In the present study, we performed Illumina sequencing to produce a 22,996,612 clean reads representing with...
Light-dependent transcriptional events during resting egg hatching of the rotifer Brachionus manjavacas [0.03%]
光照诱导轮虫Brachionus manjavacas静卵孵化的转录事件分析
Hee-Jin Kim,Koushirou Suga,Bo-Mi Kim et al.
Hee-Jin Kim et al.
Rotifer resting eggs often have to endure harsh environmental conditions during the diapause phase. They are stimulated by light to hatch. In order to study the hatching mechanism, we observed resting eggs and measured their transcriptional...
R Andrew Cameron,Parul Kudtarkar,Susan M Gordon et al.
R Andrew Cameron et al.
Echinoderm genome sequences are a corpus of useful information about a clade of animals that serve as research models in fields ranging from marine ecology to cell and developmental biology. Genomic information from echinoids has contribute...
Genome sequence of aerobic anoxygenic phototrophic bacterium Erythrobacter sp. JL475, isolated from the South China Sea [0.03%]
来源于南中国海的需氧厌氧光合菌红细菌株JL475基因序列
Qiang Zheng,Yanting Liu,Jia Sun et al.
Qiang Zheng et al.
Erythrobacter sp. JL475 is a bacteriochlorophyll a-containing aerobic anoxygenic photo-heterotrophic bacterium. Here, we report the draft genome sequence of Erythrobacter sp. JL475 isolated from the South China Sea. It comprises ~3.26Mbp in...
Draft genome sequence of algal polysaccharides degradation bacterium, Flammeovirga sp. OC4 [0.03%]
藻多糖降解菌Flammeovirga_OC4的基因组草图序列草案
Yang Liu,Zhiwei Yi,Yaping Cai et al.
Yang Liu et al.
Flammeovirga sp. OC4 was isolated from seawater sample of the South China Sea using the method of in-situ-enrichment, which has the ability to degrade algal polysaccharides. Colonies are reddish orange in the exponential growth phase and tu...
Transcriptomic response to shell damage in the Antarctic clam, Laternula elliptica: time scales and spatial localisation [0.03%]
南极洲贻贝Laternula elliptica外壳受损的转录组响应：时间尺度和空间定位
Victoria A Sleight,Michael A S Thorne,Lloyd S Peck et al.
Victoria A Sleight et al.
Mollusc shell is built-up by secretion from the mantle and is the result of a controlled biological process termed biomineralisation. In general mollusc shells are well characterised however, the molecular mechanisms used by molluscs to pro...
Effects of the oxylipin-producing diatom Skeletonema marinoi on gene expression levels of the calanoid copepod Calanus sinicus [0.03%]
海洋硅藻通过产生氧脂质影响中华哲水蚤基因表达水平的研究
Chiara Lauritano,Ylenia Carotenuto,Valentina Vitiello et al.
Chiara Lauritano et al.
Diatoms are eukaryotic unicellular plants that constitute one of the major components of marine phytoplankton, comprising up to 40% of annual productivity at sea and representing 25% of global carbon-fixation. Diatoms have traditionally bee...