A phylogenetic framework for the kingdom Fungi based on 18S rRNA gene sequences [0.03%]
基于18S rRNA基因序列的真菌界系统发育框架
Pablo Yarza,Pelin Yilmaz,Katrin Panzer et al.
Pablo Yarza et al.
The usage of molecular phylogenetic approaches is critical to advance the understanding of systematics and community processes in the kingdom Fungi. Among the possible phylogenetic markers (or combinations of them), the 18S rRNA gene appear...
Tissue-specific transcriptomic profiling provides new insights into the reproductive ecology and biology of the iconic seagrass species Posidonia oceanica [0.03%]
组织特异性转录组分析为研究标志性海草波西多尼亚海草的繁殖生态和生物学提供了新的见解
Laura Entrambasaguas,Marlene Jahnke,Elio Biffali et al.
Laura Entrambasaguas et al.
Seagrasses form extensive meadows in shallow coastal waters and are among the world's most productive ecosystems. Seagrasses can produce both clonally and sexually, and flowering has long been considered infrequent, but important for mainta...
Characterization of autonomous families of Tc1/mariner transposons in neoteleost genomes [0.03%]
新 teleost 鱼类基因组中自主 Tc1/Mariner 转座子族的特征研究
Bo Gao,Wei Chen,Dan Shen et al.
Bo Gao et al.
We report the comprehensive analysis of Tc1/mariner transposons in six species of neoteleost (cod, tetraodon, fugu, medaka, stickleback, and tilapia) for which draft sequences are available. In total, 33 Tc1/mariner families were identified...
De novo transcriptome assembly and annotation for the desert rainbowfish (Melanotaenia splendida tatei) with comparison with candidate genes for future climates [0.03%]
沙漠虹彩鱼(Melanotaeniapseudoinfixa)的新转录组组装与注释以及与未来气候候选基因的比较研究
Katie Gates,Jonathan Sandoval-Castillo,Louis Bernatchez et al.
Katie Gates et al.
Transcriptomics via RNA-seq has rapidly emerged as a powerful tool for ecological and evolutionary studies, enabling genome-scale studies of adaptation via regulation of global gene expression. Here we present a de novo transcriptome for th...
Complete genome sequence and analysis of three kinds of β-agarase of Cellulophaga lytica DAU203 isolated from marine sediment [0.03%]
来源于海洋沉积物的Cellulophaga lytica DAU203菌株三种β-agarase种类基因组序列及其分析
Yong-Suk Lee,Yong-Lark Choi
Yong-Suk Lee
Cellulophaga lytica DAU203 (KACC 19187), isolated from the marine sediment in Korea, has a strong ability to degrade agar. The genome of C. lytica DAU203 contains a single chromosome that is 3,952,957bp in length, with 32.02% G+C contents. ...
Complete genome of a metabolically-diverse marine bacterium Shewanella japonica KCTC 22435T [0.03%]
代谢多样型海洋细菌舍温那氏菌日本模式株(KCTC 22435)的基因组序列
Kyung Mo Kim,Hanna Choe,Byung Kwon Kim et al.
Kyung Mo Kim et al.
Shewanella japonica KCTC 22435T is a facultatively anaerobic, Gram-negative, mesophilic, rod-shaped bacterium isolated from sea water at the Pacific Institute of Bio-organic Chemistry of the Marine Experimental Station, Troitza Bay, Gulf of...
Pelagic and benthic communities of the Antarctic ecosystem of Potter Cove: Genomics and ecological implications [0.03%]
南极波特尔考夫湾生态系统中的pelagic和benthic群落：基因组学及其生态意义
D Abele,S Vazquez,A G J Buma et al.
D Abele et al.
Molecular technologies are more frequently applied in Antarctic ecosystem research and the growing amount of sequence-based information available in databases adds a new dimension to understanding the response of Antarctic organisms and com...
Transcriptome response of previtellogenic ovary in Anguilla japonica after artificial hormone injection [0.03%]
人工激素诱导日本鳗鲡促成熟卵巢转录组分析
Shang-Chien Lee,Chung-Der Hsiao,Yung-Song Wang et al.
Shang-Chien Lee et al.
In this study we investigate the intra-ovarian pathways underlying early follicle development in Japanese eels, Anguilla japonica. We conducted high-throughput transcriptome analyses in the initial development of the ovary via the next-gene...
Comparative profiling of microbial community of three economically important fishes reared in sea cages under tropical offshore environment [0.03%]
热带近海环境下网箱养殖三种重要经济鱼类微生物群落的比较分析
M K Rasheeda,Vijaya Raghavan Rangamaran,Senthilkumar Srinivasan et al.
M K Rasheeda et al.
The present study was undertaken to evaluate the microbial composition of farmed cobia pompano and milkfish, reared in sea-cages by culture-independent methods. This study would serve as a basis for assessing the general health of fish, ide...
Metabolism of branched-chain amino acids revealed by transcriptome analysis in Vibrio alginolyticus [0.03%]
利用转录组分析揭示伏胜弧菌分支链氨基酸代谢路径
Yiqin Deng,Xiongqi Ding,Xiaochun Huang et al.
Yiqin Deng et al.
Branched-chain amino acids (BCAAs) play important roles in nitrogen metabolism. However, little is known about the metabolism of BCAAs in the fish pathogen Vibrio alginolyticus. In this study, the global gene expression patterns of V. algin...