Genome analysis of the heterotrophic microalga Thraustochytrium sp. TN22 to identify genes involved in exopolysaccharide and carotenoid biosynthesis pathways [0.03%]
基因组分析异养微藻Thraustochytrium sp. TN22中涉及多糖和类胡萝卜素生物合成途径的基因
Hoang Thi Minh Hien,Le Thi Thom,Quang Huy Pham et al.
Hoang Thi Minh Hien et al.
In this study, the genome of Thraustochytrium sp. TN22, a heterotrophic marine microalga, was sequenced, assembled and annotated using the Illumina NovaSeq 6000, PacBio RS II and MinION platform to identify genes and EPS and carotenoid bios...
Complete genome sequence of Pseudoalteromonas sp. Xi13 capable of degrading κ-selenocarrageenan isolated from the floating ice of Southern Ocean [0.03%]
一株分离自南极浮冰的可降解κ-硒角叉菜胶的海洋假交替单胞菌全基因组分析：Pseudoalteromonas sp. Xi13genome announcements
Xixi Wang,Chen Liang,Xihong Yang et al.
Xixi Wang et al.
κ-Selenocarrageenan, a type of selenized carrageenan polysaccharide, can be degraded by bacteria into oligosaccharides, which has a lower molecular weight and a higher bioavailability. However, research on the microbial degradation of κ-s...
Complete genome sequence of Polaribacter sejongensis NJDZ03 exhibiting diverse macroalgal polysaccharide-degrading activity [0.03%]
具有多样性的大型褐藻多糖降解活性的Polaribacter sejongensis NJDZ03 完整基因组序列
Qian Zhang,Liping Fu,Yuanyuan Gui et al.
Qian Zhang et al.
A macroalgal polysaccharide-degrading bacterial strain, Polaribacter sejongensis NJDZ03, was isolated from the surface of a species of Desmarestia, a seaweed genus endemic to Antarctica. To explore the mechanism underlying the multiple poly...
Characterization of Chaetoceros lorenzianus-infecting DNA virus-derived promoters of genes from open reading frames of unknown function in Phaeodactylum tricornutum [0.03%]
角甲藻开阅读框未知功能基因的启动子特征研究
Takashi Kadono,Yuji Tomaru,Nao Sato et al.
Takashi Kadono et al.
Promoters are key elements for the regulation of gene expression. Recently, we investigated the activity of promoters derived from marine diatom-infecting viruses (DIVs) in marine diatoms. Previously, we focused on potential promoter region...
Metataxanomic, bioactivity and microbiome analysis of Red Sea marine sponges from Egypt [0.03%]
埃及红海海绵的元 taxanomic、生物活性和微生物组分析
Hasnaa L Kamel,Amro Hanora,Samar M Solyman
Hasnaa L Kamel
Red Sea marine sponges (phylum Porifera) and associated microorganisms harbor a wide range of microorganisms, which are considered an essential source of bioactive products. In this study, we screened both the crude extracts of Red Sea mari...
Transcriptomic analysis of brine shrimp Artemia franciscana across a wide range of salinities [0.03%]
宽盐度范围内分析卤虾Artemia franciscana转录组
JunMo Lee,Byung Cheol Cho,Jong Soo Park
JunMo Lee
Brine shrimp Artemia franciscana, a commercially important species, can thrive in a wide range of salinities and is commonly found in hypersaline lakes and solar salterns. Transcriptome analysis can enhance the understanding of the adaptati...
Metagenomic and Recombination Analyses of Antimicrobial Resistance Genes from Recreational Waters of Black Sea Coastal Areas and Other Marine Environments Unveil Extensive Evidence for Their both Intrageneric and Intergeneric Transmission across Genetically Very Diverse Microbial Communities [0.03%]
里海沿海地区及其他海洋环境的娱乐用水中抗生素抗性基因的元基因组学和重组分析揭示了其在遗传多样性微生物群落间广泛的种内及种间传播证据
Ekaterine Gabashvili,Saba Kobakhidze,Tamar Chkhikvishvili et al.
Ekaterine Gabashvili et al.
Microbial communities of marine coastal recreation waters have become large reservoirs of AMR genes (ARGs), contributing to the emergence and transmission of various zoonotic, foodborne and other infections that exhibit resistance to variou...
Benefits of merging paired-end reads before pre-processing environmental metagenomics data [0.03%]
在对环境元基因组学数据进行预处理之前合并配对末端读段的好处
Midhuna Immaculate Joseph Maran,Dicky John Davis G
Midhuna Immaculate Joseph Maran
Background: High throughput sequencing of environmental DNA has applications in biodiversity monitoring, taxa abundance estimation, understanding the dynamics of community ecology, and marine species studies and conservat...
Transcriptome of the coral Mussismilia braziliensis symbiont Sargassococcus simulans [0.03%]
珊瑚Mussismilia braziliensis共生体Sargassococcus simulans的转录组
Tooba Varasteh,Diogo Tschoeke,Arthur W Silva-Lima et al.
Tooba Varasteh et al.
A transcriptomic profile of Sargassococcus simulans 103B3, isolated from the coral Mussismilia braziliensis in Abrolhos, Brazil, is presented. A total of 631.3 Mbp transcriptomic sequences were obtained. The transcriptomic analysis disclose...
De novo assembly and annotation of the whole transcriptome of Muraenesox cinereus [0.03%]
条鳍鱼全转录本的从头拼接与注释
Binbin Shan,Yan Liu,Changping Yang et al.
Binbin Shan et al.
In this study, we generated the transcriptome of Muraenesox cinereus from four combined tissues (muscle, sexual, liver and heart) using high-seq sequencing technology. De novo assembly was performed using Trinity software and a total of 62,...