The missing timepiece: Optimal time allocation in the work-constraint cycle of autonomous agents [0.03%]
缺失的计时器：自主代理工作约束周期中的最优时间分配
Luna Wang,Haruka Terauchi,Tom Froese
Luna Wang
Kauffman's work-constraint (W-C) cycle captures the logical interdependence of work and constraint production in living systems, but leaves a fundamental dimension unexplored: when should each phase occur, and for how long? We argue that th...
The bridges evolution built: In search of mechanisms that couple scales of perception and action [0.03%]
桥梁的进化构建：寻找机制以连接感知与行动的不同层次
Madhur Mangalam
Madhur Mangalam
Movement cascades across scales. A reach for a cup enlists ion channels opening on microsecond timescales, motor units summating on millisecond timescales, postural adjustments stabilizing the body over hundreds of milliseconds, and habits ...
Michael Stiber,Natalie Gonzales,Jewel YunHsuan Lee
Michael Stiber
Cultures of neurons grown on multi-electrode arrays have become a common experimental preparation for investigating developing neural networks. Experiment and simulation have shown that these developing networks eventually exhibit bursting ...
Salvatore Chirumbolo
Salvatore Chirumbolo
This manuscript discusses how recent models can clarify the emergence of life-like organization, focusing on the relationship between Carr's agent-based protocell simulations and the Prigoginian Informational Dissipation (PID) framework. Ca...
Memory-based strategy reputation and adaptive learning in spatial evolutionary games: A robust agent-based model for cooperation dynamics [0.03%]
基于记忆的战略声誉和自适应学习在空间演化博弈中的作用：合作动力学的鲁棒智能体模型
Baochen Li,Shouwei Li,Bo Peng
Baochen Li
This paper studies cooperation in spatial evolutionary games by combining local memory-based reputation with heterogeneous Fermi learning. Agents are placed on a two-dimensional lattice and repeatedly play the Prisoner's Dilemma with their ...
Coherent Photonic Biofields: Revisiting Fritz-Albert Popp's Hypothesis [0.03%]
相干光子生物场：重新审视弗里茨-阿尔伯特·波普的假设
Rick Sá
Rick Sá
Biophotonic emission has long been considered a weak byproduct of metabolic activity, but growing evidence suggests that it may exhibit non-classical properties indicative of underlying coherence. Building on the pioneering work of Fritz-Al...
Ruliological Resilience: Pattern Restoration and Robustness in Wolfram Patterns. A Basis for Regeneration, Not Just in Cone Shells? [0.03%]
鲁利学韧性：沃尔夫拉姆模式中的图案恢复与稳健性。不仅是锥壳再生的基础？
Syed Hussain Ather,Richard Gordon
Syed Hussain Ather
This study investigates recovery dynamics in elementary cellular automata (ECA) following localized perturbations. Using all 256 Wolfram rules, we introduce controlled disruptions ("injuries") at specified pattern growth steps and quantify ...
The quantum-to-classical transducer: A thermodynamic and quantum mechanical framework for the emergence of bioenergetics [0.03%]
从量子到经典转换器：生物能量学出现的热力学和量子力学框架
Prasanth S Ariyannur
Prasanth S Ariyannur
The universal conservation of the Proton-Motive Force (PMF) indicates that the chemiosmotic coupling was a primary requisite for abiogenesis. However, the mechanism governing Kinetic State Selection (KSS)-the process by which specific metab...
Forward-backward gene expression binarization for boolean state inference over a known regulatory network [0.03%]
基于已知调控网络的正反向基因表达二值化布尔状态推断方法研究
Ismail Belgacem,Franck Delaplace
Ismail Belgacem
Binarization of gene expression data is a critical prerequisite for the synthesis of Boolean gene regulatory network (GRN) models from omics datasets. In practice, thresholding methods remain the dominant approach, yet they oversimplify the...
Partial-label metric ceilings for evaluating gene regulatory networks inferred from single-cell foundation models [0.03%]
基于单细胞基础模型的基因调控网络推断的部分标签度量上限评估方法
Ihor Kendiukhov
Ihor Kendiukhov
Gene regulatory network (GRN) benchmarks are typically interpreted as if curated references were complete, yet they are not. We formalize observed-metric ceilings under partial positive labels and reanalyze existing benchmark outputs across...