Exploring the Satellitome of the Pest Aphid Acyrthosiphon pisum (Hemiptera, Aphididae): Insights Into Genome Organization and Intraspecies Evolution [0.03%]
pea蚜卫星基因组的研究:对基因组结构和种内进化的见解
Lucas Albuquerque,Diogo Milani,Emiliano Martí et al.
Lucas Albuquerque et al.
Satellite DNAs (satDNAs), ubiquitous sequences in eukaryotic genomes, play a crucial role in genome organization, function, and evolution. The pea aphid Acyrthosiphon pisum is a major crop pest, and an emerging model for ecological, develop...
Genome-wide analyses of copy number variants in 751 Populus trichocarpa individuals from natural populations [0.03%]
基于自然群体中751份美洲黑杨(Populus trichocarpa Torr. & A. Gray)个体的拷贝数变异全基因组分析
Yihan Wu,Keith Adams
Yihan Wu
Copy number variations (CNVs), including duplications and deletions of the genome ranging up to 1Mb, are an important contributor to genomic variation, and may influence phenotypic variation. They are relatively understudied compared to sin...
On rooting and dating viral trees with a changing evolutionary rate following host-switching [0.03%]
基于宿主转换后变化的进化速率根植和确定病毒进化树的时间上限的研究
Xuhua Xia
Xuhua Xia
Viral host-switching from host H1 to host H2 is often associated with changes in viral evolutionary rate r. The pre-switching rate r1 in H1 may stay the same or increase/decrease to a new rate r2 in H2 during the host-switching and host-ada...
Evolution of dosage-sensitive genes by tissue-restricted expression changes [0.03%]
组织特异性表达变化驱动剂量敏感基因的演化
Alan M Rice,Yuanshuo Li,Pauric Donnelly et al.
Alan M Rice et al.
Dosage-sensitive genes have characteristic patterns of evolution that include being refractory to small-scale duplication, depleted on human benign copy number variants (CNVs) and enriched on pathogenic CNVs. This intolerance to copy number...
Sexual Antagonism and Sex Determination in Three Syngnathid Species Alongside a Male Pregnancy Gradient [0.03%]
三种不同的拟刺鱼属物种中的性别对抗和性别决定(这些物种的雄性怀孕的程度不同)
Arseny Dubin,Jamie Parker,Astrid Böhne et al.
Arseny Dubin et al.
The allocation of energy toward gamete production, parental care, mate choice, and secondary sexual signals fosters divergence in selection between the sexes, giving rise to opposing fitness strategies and sexual antagonism. The shared gene...
"Select and Resequence" methods enable a genome wide association study of the dimorphic human fungal pathogen Coccidioides posadasii [0.03%]
“选择和重新排序”方法可对二态性人形真菌病原体帕氏 Cocciodiodes 全基因组进行关联研究
Mark Voorhies,Bastian Joehnk,Jessie Uehling et al.
Mark Voorhies et al.
Next-generation sequencing has unlocked a wealth of genotype information for wild populations, but interpreting it in the context of phenotypes remains a bottleneck, particularly for non-model organisms that are difficult to manipulate. To ...
Positive selection of a starch synthesis gene and phenotypic differentiation of starch accumulation in symbiotic and free-living coral symbiont dinoflagellate species [0.03%]
共生和自由生活的珊瑚内共生藻淀粉积累表型分化及淀粉合成基因的正向选择
Yuu Ishii,Shunsuke Kanamori,Ryusaku Deguchi et al.
Yuu Ishii et al.
Symbiosis is a basis for species diversification through interactions between organisms. In tropical and subtropical oceans, dinoflagellate symbionts belonging to the family Symbiodiniaceae, including the genus Symbiodinium, support the flo...
Fitness effect of the isoniazid resistance mutation S315T of the catalase-peroxidase enzyme KatG of Mycobacterium tuberculosis [0.03%]
卡介苗耐异烟肼突变S315T对过氧化物酶 catalese (KatG) 酶的适应性效应研究
Ugo Bastolla,Mikhail Rotkevich,Miguel Arenas et al.
Ugo Bastolla et al.
The mutation S315T of the catalase-peroxidase protein KatG of Mycobacterium tuberculosis is the most common mutation that confers resistance to the prodrug isoniazid. Here we reconstruct its evolutionary history in 145 whole genome sequence...
Cell compartment is a predictor of protein rate of evolution, but not in the manner expected: evidence against the extended complexity hypothesis [0.03%]
细胞区室可以预测蛋白质的进化速率,但并非如预期的方式:反对扩展复杂性假说的证据
Juan Rivas-Santisteban,Pablo Yubero,Laurence D Hurst
Juan Rivas-Santisteban
What accounts for the variation between proteins in their rate of evolution per synonymous substitution (i.e. dN/dS, alias ω )? Previous analyses suggested that cell location is predictive, with intracellular proteins evolving slower than ...
Harbouring Starships: The accumulation of large Horizontal Gene Transfers in Domesticated and Pathogenic Fungi [0.03%]
寄居星舰:在经济真菌和病原菌中大量水平基因转移的积累
Samuel ODonnell,Gabriela Rezende,Jean-Philippe Vernadet et al.
Samuel ODonnell et al.
Human-related environments, including food and clinical settings, present microorganisms with atypical and challenging conditions that necessitate adaptation. Several cases of novel horizontally acquired genetic material associated with ada...