Trait-Based Biomonitoring Using eDNA Metabarcoding to Assess Anthropogenic Disturbances on Freshwater Fish Communities [0.03%]
基于eDNA metabarcoding的性状生物监测及其在评估人为干扰对淡水鱼类群落影响方面的应用
Olivier Morissette,Guillaume Côté,Marc-Antoine Couillard et al.
Olivier Morissette et al.
Various anthropogenic disturbances affect the succession of aquatic habitats along dendritic river networks. Bioindicator taxa, such as fish, can be used to assess the effects of these disturbances on habitat quality. Environmental DNA (eDN...
Tetraopes Milkweed Beetle Genomes Elucidate the Adaptive Basis of a Temperate Coevolutionary Radiation [0.03%]
四眼斑蛇豆象基因组阐明了温带协同演化辐射的适应性基础
Sangil Kim,Brian D Farrell
Sangil Kim
The coevolutionary radiation of 27 species of Tetraopes longhorned beetles and their Asclepias milkweed hosts represents a classic example of adaptive evolution driven by plant chemical defences and herbivore counteradaptations. Investigati...
SwarmGenomics: A Unified Pipeline for Individual-Based Whole-Genome Analyses [0.03%]
SwarmGenomics：个体为基础的全基因组分析统一流程
Aure Kylmänen,Yu-Chi Chen,Sahar Javaheri Tehrani et al.
Aure Kylmänen et al.
Advances in sequencing technologies have made whole-genome data widely accessible, enabling research in population genetics, evolutionary biology, and conservation. However, analysing whole-genome sequencing (WGS) data remains challenging, ...
Robin S Waples
Robin S Waples
Researchers often use multiple genetic methods to estimate contemporary effective population size (Ne), but few formally combine estimates despite potential benefits for increasing precision. Maximising benefits requires an optimal, inverse...
Developing and Evaluating Aquatic Passive Sampling of Environmental DNA for Microbial Community Profiling [0.03%]
用于微生物群落特征描述的水体环境中被动采样分析的研究及评价
Cheng Qian,Gert-Jan Jeunen,Wu Han et al.
Cheng Qian et al.
Environmental DNA (eDNA) metabarcoding has transformed biodiversity monitoring across taxa from bacteria to mammals, yet sample collection remains a major bottleneck. Passive sampling via adsorption and entrapment has emerged as a promising...
Design and Application of a Genome-Wide SNP Array to Improve Conservation Outcomes in the Critically Endangered Southern Corroboree Frog [0.03%]
用于改善极度濒危南方彩蟾保护成果的全基因组SNP芯片的设计与应用
Mikaeylah J Davidson,Kyall R Zenger,J Scott Keogh et al.
Mikaeylah J Davidson et al.
Species-specific genomic information has the potential to transform modern conservation management strategies through improved genomic assessment and management outcomes. Gaining genomic insights into genetic diversity, adaptability and pot...
Reliable Inference of Phylogenomic Relationship via Assembly-Based Strategy Accommodating Raw Reads and Proteins [0.03%]
基于基因组装配的策略可靠推断原核物种系统发育关系及其在大数据中的应用
Yunlong Li,Xu Liu,Chong Chen et al.
Yunlong Li et al.
Phylogenomics is a transformative approach in systematics, conservation biology, and biomedical research, enabling the inference of evolutionary relationships by leveraging hundreds to thousands of genes from genomic or transcriptomic data....
Assessment of High Throughput Sequencing Quality of Host DNA Enriched From Faeces: A Case From Captive Tiger [0.03%]
基于粪便样本高通量测序质量评估宿主DNA：以圈养虎为例
Jincheng Yang,Le Zhang,Liangyu Cui et al.
Jincheng Yang et al.
Faeces serve as a widely used non-invasive material in wildlife studies, from which host DNA can be enriched for high-throughput sequencing. However, the characteristics of faecal DNA sequencing, particularly the relationship between sequen...
The FORGENIUS Genomic Resources: New Genotyping Tools and Genomic Data for 23 Forest Tree Species and Their Genetic Conservation Units [0.03%]
FORGENIUS基因资源：23个森林树种及其遗传保护单位的新基因分型工具和基因组数据
Sara Pinosio,Francesca Bagnoli,Camilla Avanzi et al.
Sara Pinosio et al.
Genetic diversity is a critical but often overlooked component of biological diversity. The European H2020 FORGENIUS project is aimed at increasing the quality and quantity of genetic data to start monitoring the European network of forest ...
Sampling Design and Sample Processing Affect Soil Biodiversity Assessments [0.03%]
取样设计和样品处理影响土壤生物多样性评估
Meirong Chen,Olesya Dulya,Vladimir Mikryukov et al.
Meirong Chen et al.
Biodiversity surveys require an appropriate sampling design for optimal performance and comparability across space and time and across studies. Based on PacBio and Illumina amplicon sequencing of animals, bacteria and fungi, we assessed and...