Unlocking Demography: Developing an eDNA-Based Toolkit to Measure Sex Ratios From Populations [0.03%]
解开人口的秘密：开发基于eDNA的性别比例测量工具包
Emilie A Didaskalou,James France,Milena Cvijanović et al.
Emilie A Didaskalou et al.
Demographic information, such as sex ratios, is essential for understanding population dynamics and informing conservation strategies. Yet obtaining sex ratios in natural populations can be challenging due to logistical, ethical and legal c...
Moss-Accumulated eDNA Is a Promising Source for Terrestrial Biodiversity Surveys Across the Tree of Life and Biomes [0.03%]
地衣积累的环境DNA是陆地生物多样性调查的有力工具
Henry F N Lankes,Lene Bruhn Pedersen,Rasmus Stenbak Larsen et al.
Henry F N Lankes et al.
Developments in the environmental DNA (eDNA) field have revolutionised our ability to map biodiversity by providing cost-effective and non-invasive means to survey organisms across the tree of life. In the terrestrial realm, a variety of eD...
Maddie E James
Maddie E James
Accurate Runs of Homozygosity Estimation From Low Coverage Genome Sequences in Non-Model Species [0.03%]
低覆盖基因组测序下非模型物种精确的纯合区估计方法
Rebecca S Taylor,Micheline Manseau,Paul J Wilson
Rebecca S Taylor
Runs of homozygosity (ROH) are increasingly being analysed using whole genome sequences in non-model species as a measure of inbreeding and to assess demographic history, thus providing useful information for conservation. However, most stu...
The Emergence of a CRISPR-Cas Revolution in Ecology: Applications, Challenges, and an Ecologist's Overview of the Toolbox [0.03%]
生态学中的CRISPR-Cas革命：应用、挑战及工具箱综述
Amadeus Plewnia,Brandon D Hoenig,Stefan Lötters et al.
Amadeus Plewnia et al.
CRISPR-Cas (Clustered Regularly Interspaced Short Palindromic Repeats-CRISPR-associated nucleases) systems allow researchers to detect, capture, and even alter parts of an organism's genome. However, while the use of CRISPR-Cas has revoluti...
Optimising Genome-Wide Detection of Runs of Homozygosity: Impacts of Reference Genome Quality and Sequencing Parameters on Inbreeding Assessment [0.03%]
优化全基因组纯合子Runs检测：参考基因组质量和测序参数对近交评估的影响
Minhui Shi,Haimeng Li,Aaron B A Shafer et al.
Minhui Shi et al.
Inbreeding and inbreeding depression pose a critical challenge to the persistence of small and isolated populations, driving the need for precise assessment of genomic metrics. Genome-wide runs of homozygosity (ROH) have been widely used fo...
Advancing Yeast Identification Using High-Throughput DNA Barcode Data From a Curated Culture Collection [0.03%]
利用经过整理的培养物收藏品中的高通量DNA条形码数据推进酵母鉴定
Duong Vu,Michel de Vries,Bert Gerrits van den Ende et al.
Duong Vu et al.
Yeast identification is essential in fields ranging from microbiology and biotechnology to food science and medicine. While DNA barcoding has become the standard for identifying cultured strains, environmental DNA (eDNA) metabarcoding has r...
Development of High-Throughput Genomic Resources to Inform White-Tailed Deer Population and Disease Management [0.03%]
开发高效基因组资源以促进白尾鹿种群和疾病管理
David Navarro,Emily K Latch,Anaïs K Tallon et al.
David Navarro et al.
White-tailed deer (Odocoileus virginianus) are the most abundant and widespread cervid in North America. Genetic data are used as a tool to monitor populations and make management decisions for this game species. However, the development an...
Variant Calling in the Goldilocks Zone: How Reference Genome Choice and Read Mapping Stringency Impact Heterozygosity Estimates and Phylogenetic Analyses [0.03%]
金发姑娘区的变异呼叫：参考基因组的选择和读段比对严格程度如何影响杂合度估计及系统发育分析
Rebekah A Mohn,Mira Garner,Paul S Manos et al.
Rebekah A Mohn et al.
The increasing numbers of published reference genomes and affordability of whole genome resequencing have enabled multispecies population genomic and phylogenomic studies on non-model organisms, but they raise a new question for comparative...
A Logratio Approach to the Analysis of Autosomal Genotype Frequencies Across Multiple Samples [0.03%]
基于多个样本的常染色体基因型频率的对数比方法分析
Jan Graffelman
Jan Graffelman
More than 25 years ago, Aitchison showed that the logratio principal component analysis of multiple samples of a biallelic polymorphism can evidentiate the Hardy-Weinberg law. However, hitherto compositional data analysis, that is, the logr...