Troy N Rowan,Robert D Schnabel,Jared E Decker
Troy N Rowan
Directional selection alters the genome via hard sweeps, soft sweeps, and polygenic selection. However, mapping polygenic selection is difficult because it does not leave clear signatures on the genome like a selective sweep. In populations...
Development and evaluation of a novel single nucleotide polymorphism panel for North American bison [0.03%]
北美野牛新型单核苷酸多态性面板的开发与评估
Sam Stroupe,James N Derr
Sam Stroupe
Genome-wide single nucleotide polymorphism (SNP) genotyping platforms have become increasingly popular in characterizing livestock and wildlife populations, replacing traditional methods such as microsatellite fragment analysis. Herein, we ...
Modifications to gene body methylation do not alter gene expression plasticity in a reef-building coral [0.03%]
基因体内甲基化修饰并不改变造礁珊瑚的基因表达可塑性
Evelyn Abbott,Coral Loockerman,Mikhail V Matz
Evelyn Abbott
As coral reefs continue to decline due to climate change, the role of coral epigenetics (specifically, gene body methylation, GBM) in coral acclimatization warrants investigation. The evidence is currently conflicting. In diverse animal phy...
Local environments, not invasive hybridization, influence cardiac performance of native trout under acute thermal stress [0.03%]
局部环境而非入侵杂交影响本土虹鳟在急性热应激下的心脏表现
Jeffrey T Strait,Jared A Grummer,Nicholas F Hoffman et al.
Jeffrey T Strait et al.
Climate-induced expansion of invasive hybridization (breeding between invasive and native species) poses a significant threat to the persistence of many native species worldwide. In the northern U.S. Rocky Mountains, hybridization between n...
Genomic prediction based on preselected single-nucleotide polymorphisms from genome-wide association study and imputed whole-genome sequence data annotation for growth traits in Duroc pigs [0.03%]
基于全基因组关联分析预选单核苷酸多态性位点和基因组序列数据对杜洛克生长性状进行基因组预测及注释
Yuling Zhang,Zhanwei Zhuang,Yiyi Liu et al.
Yuling Zhang et al.
The use of whole-genome sequence (WGS) data is expected to improve genomic prediction (GP) power of complex traits because it may contain mutations that in strong linkage disequilibrium pattern with causal mutations. However, a few previous...
Genomic evidence for domestication selection in three hatchery populations of Chinook salmon, Oncorhynchus tshawytscha [0.03%]
帝王三文鱼(Oncorhynchus tshawytscha)三个养殖场种群家养选择的基因证据
Natasha S Howe,Matthew C Hale,Charles D Waters et al.
Natasha S Howe et al.
Fish hatcheries are widely used to enhance fisheries and supplement declining wild populations. However, substantial evidence suggests that hatchery fish are subject to differential selection pressures compared to their wild counterparts. D...
Long non-coding RNAs mediate fish gene expression in response to ocean acidification [0.03%]
长非编码RNA介导鱼类基因对海洋酸化的表达响应
Jingliang Kang,Arthur Chung,Sneha Suresh et al.
Jingliang Kang et al.
The majority of the transcribed genome does not have coding potential but these non-coding transcripts play crucial roles in transcriptional and post-transcriptional regulation of protein-coding genes. Regulation of gene expression is impor...
Signatures of selection in Mulinia lateralis underpinning its rapid adaptation to laboratory conditions [0.03%]
Mulinia lateralis对实验室条件的快速适应下的选择签名
Zujing Yang,Ang Zhao,Mingxuan Teng et al.
Zujing Yang et al.
The dwarf surf clam, Mulinia lateralis, is considered as a model species for bivalves because of its rapid growth and short generation time. Recently, successful breeding of this species for multiple generations in our laboratory revealed i...
DNA methylation and transcriptome analysis reveal epigenomic differences among three macaque species [0.03%]
三種芚猴的DNA甲基化和轉錄組分析揭示表觀基因組差異
Jiao Wang,Xuyuan Liu,Yue Lan et al.
Jiao Wang et al.
Macaques (genus Macaca) are the most widely distributed non-human primates, and their evolutionary history, gene expression profiles, and genetic differences have been extensively studied. However, the DNA methylomes of macaque species are ...
Utility of parentage-based tagging for monitoring Coho salmon (Oncorhynchus kisutch) in the interior Columbia River basin [0.03%]
基于亲子关系的标签在监测哥伦比亚河内陆流域的银大麻哈鱼(Oncorhynchus kisutch)中的作用
Rebekah L Horn,Hayley M Nuetzel,Becky Johnson et al.
Rebekah L Horn et al.
By the 1980s, after decades of declining numbers in the mid-1900s, Coho salmon (Oncorhynchus kisutch) were considered extirpated from the interior Columbia River. In the mid-1990s, the Confederated Tribes of the Umatilla Indian Reservation,...