Analysis and evaluation of different sequencing depths from 5 to 20 million reads in shotgun metagenomic sequencing, with optimal minimum depth being recommended [0.03%]
鸟枪法宏基因组测序不同测序深度（从500万到2000万reads）的分析与评估及推荐最优最小测序深度
Jin Liu,Xiaokai Wang,Hailiang Xie et al.
Jin Liu et al.
Our study was to analyze and evaluate the impact of different shotgun metagenomic sequencing depths from 5 to 20 million in metagenome-wide association studies (MWASs), and to determine the optimal minimum sequencing depth. We included a se...
Marsupial satellite DNA as faithful reflections of long-terminal repeat retroelement structure [0.03%]
有袋动物卫星DNA是长末端重复型逆转座子结构的忠实反映
Sakura Hayashi,Yusuke Honda,Etsuko Kanesaki et al.
Sakura Hayashi et al.
Long terminal repeat (LTR) retroelements, including endogenous retroviruses, are one of the origins of satellite DNAs. However, the vast majority of satellite DNAs originating from LTR retroelements consists of parts of the element. In addi...
Patterns of genome size variation in caridean shrimps: new estimates for non-gambarelloides Synalpheus species [0.03%]
枪虾类十足目种基因组大小变化模式：非 gambarelloides synalpheus 种的新估计值
Isabela R R Moraes,Luis Miguel Pardo,Cristian Araya-Jaime et al.
Isabela R R Moraes et al.
Genome size (GS) or DNA nuclear content is considered a useful index for making inferences about evolutionary models and life history in animals, including taxonomic, biogeographical, and ecological scenarios. However, patterns of GS variat...
Identification of novel candidate of brown planthopper resistance gene Bph44 in rice (Oryza sativa L.) [0.03%]
水稻白背飞虱新抗性基因Bph44的鉴定
Iwan Kiswanto,Lita Soetopo,Afifuddin Latif Adiredjo
Iwan Kiswanto
The brown planthopper (BPH, Nilaparvata lugens Stål) is still considered a major threat to rice farmers. Exploring novel resistance genes that relate to the BPH population in the targeted rice-growing area might be a suitable solution. We ...
Comparative analysis reveals chromosome number reductions in the evolution of African bermudagrass (Cynodon transvaalensis Burtt-Davy) [0.03%]
比较分析揭示了非洲百慕大草(Cynodon transvaalensis Burtt-Davy)进化过程中染色体数目的减少现象
Shuhao Yu,Hongxu Dong,Tilin Fang et al.
Shuhao Yu et al.
African bermudagrass (Cynodon transvaalensis Burtt-Davy) (2n = 2x = 18) belongs to the genus Cynodon, tribe Cynodonteae, subfamily Chloridoideae in the grass family Poaceae. The species is frequently crossed with common bermudagrass (Cynodo...
Genome-wide investigation and expression analysis of the AP2/ERF family for selection of agarwood-related genes in Aquilaria sinensis (Lour.) Gilg [0.03%]
沉香AP2/ERF家族基因的全基因组鉴定及表达分析
Meng-Jun Xiao,Ya-Nan Feng,Pei-Wen Sun et al.
Meng-Jun Xiao et al.
Aquilaria sinensis is an important non-timber tree species for producing high-value agarwood, which is widely used as a traditional medicine and incense. Agarwood is the product of Aquilaria trees in response to injury and fungal infection....
Assessing population genetic structure of three New Zealand stream insects using mitochondrial and nuclear DNA markers [0.03%]
基于线粒体和核DNA标记评估新西兰三种溪流昆虫的群体遗传结构
Vanessa de Araujo Barbosa,S Elizabeth Graham,Brian J Smith et al.
Vanessa de Araujo Barbosa et al.
Assessing genetic differentiation among natural populations can aid understanding of dispersal patterns and connectivity among habitats. Several molecular markers have become increasingly popular in determining population genetic structure ...
Genome organization of major tandem repeats and their specificity for heterochromatin of macro- and microchromosomes in Japanese quail [0.03%]
日本鹌鹑重大串联重复序列的基因组组织及其与大型和小型染色体异染色质的特异性关系
Maria Kulak,Aleksey Komissarov,Valerie Fillon et al.
Maria Kulak et al.
Tandemly repeated DNAs form heterochromatic regions of chromosomes, including the vital centromeric chromatin. Despite the progress in new genomic technologies, tandem repeats remain poorly deciphered and need targeted analysis in the speci...
The construction of a high-density consensus genetic map for soybean based on SNP markers derived from genotyping-by-sequencing [0.03%]
基于基因分型技术的SNP标记的高密度大豆共识遗传图谱的构建
Manel Fallah,Martine Jean,Vincent-Thomas Boucher St-Amour et al.
Manel Fallah et al.
Genetic linkage maps are used to localize markers on the genome based on the recombination frequency. Most often, these maps are based on the segregation observed within a single biparental population of limited size (n < 300) where relativ...
Genome-wide association studies identified loci associated with both feed conversion ratio and residual feed intake in Yorkshire pigs [0.03%]
全基因组关联分析鉴定出与约克夏猪饲料转化率和剩余饲料摄入量相关的位点
Kai Wang,Shujie Wang,Xiang Ji et al.
Kai Wang et al.
Feed occupies a significant proportion in the production cost of pigs, and the feed efficiency (FE) in pigs is of utmost economic importance. Hence, the objective of this study is to identify single-nucleotide polymorphisms (SNPs) and candi...