Bayesian neural networks for genomic prediction: uncertainty quantification and SNP interpretation with SHAP and GWAS [0.03%]
基于SHAP和GWAS的基因预测的贝叶斯神经网络：不确定性量化与SNP解读
Jin Sun,Xiaoran Zhang,Xiaowei You et al.
Jin Sun et al.
This study presents a Bayesian neural networks framework with LASSO regularization and the GSMeSP interpretability tool, enabling accurate, uncertainty-aware, and biologically interpretable genomic prediction. Deep learning offers significa...
Genomic approaches to build de novo elite breeding gene pools from locally adapted landraces [0.03%]
从当地适应的农家品种中利用基因组学方法构建新型精英育种基因池的新策略
Safiétou Tooli Fall,Alexander Kena,Brian R Rice et al.
Safiétou Tooli Fall et al.
Many nascent breeding programs aim to achieve genetic gain by crossing locally-elite germplasm, but a lack of systematic approaches to develop elite gene pools from locally adapted varieties hinders their progress. Motivated by the observat...
Unveiling stagnant flooding tolerance in lowland NERICAs: genomic insights and breeding prospects [0.03%]
低地NERICAs水稻潜在的耐淹性：基因组学见解和育种前景
Vimal Kumar Semwal,Shittu Afeez,Olatunde A Bhadmus et al.
Vimal Kumar Semwal et al.
Rice cultivation in the rainfed lowland ecosystem during the rainy season is prone to encounter substantial flooding challenges in the form of complete submergence or prolonged stagnant flooding. While the Sub1 gene enables rice plants to s...
The BrRLP1-BrMDAR1 module regulates the resistance to downy mildew in Brassica rapa [0.03%]
芸苔属白菜型品种中BRLLP1-BrMDAR1模块调控霜霉病抗性
Bin Zhang,Yunyun Cao,Bin Zhang et al.
Bin Zhang et al.
BrRLP1 positively regulates the resistance to downy mildew in Brassica rapa by interacting with the monodehydroascorbate reductase BrMDAR1. Downy mildew is a devastating disease that severely affects the yield and quality in Brassica rapa. ...
Genetic analysis of a quantitative trait locus associated with resistance to the root-lesion nematode Pratylenchus neglectus in triticale [0.03%]
小黑麦抗淡色禾谷螺原线虫数量性状基因座的遗传分析
Gurminder Singh,Krishna Acharya,Bonventure Mumia et al.
Gurminder Singh et al.
A QTL from rye chromosome 5R confers resistance to root-lesion nematode in triticale.Root-lesion nematode (Pratylenchus neglectus, RLN) poses a significant threat to global wheat production. High levels of RLN resistance are rare in wheat. ...
Genome-wide analysis of the sugarcane SUT gene family reveals ShSUT4 as a key regulator of abiotic stress responses [0.03%]
全基因组糖蔗SUT基因家族分析揭示ShSUT4是非生物胁迫响应的关键调节因子
Xue-Ting Zhao,Ahmad Ali,Cui-Lian Feng et al.
Xue-Ting Zhao et al.
Sucrose transporters (SUTs) are crucial for plant growth, development, and stress responses. Despite sugarcane's importance as a sugar and biofuel crop, genomic data on its SUT genes under abiotic stress are limited. In this study, 37 ShSUT...
A robust 1K-core marker set for wild germplasm management and targeted pre-breeding of rice: development and applications [0.03%]
水稻野生近缘种遗传管理与定向预育种的1K核心标记集的开发及应用
Debashree Dalai,Dipti Ranjan Pani,Swayamsiddha Aswita Dhal et al.
Debashree Dalai et al.
A core set of sequence tagged microsatellite sites (STMS) markers for Oryza sativa complex were developed, validated and utilized for pre-breding and characterization of Oryza germplasm from different taxa. Development of genome-wide distri...
A genome-wide association analysis identifies a key candidate gene controlling plant growth habit in chickpea [0.03%]
一项全基因组关联分析在鹰嘴豆中鉴定到一个控制株型的关键候选基因
Rajib Kumbhakar,Mayulika Mondal,Virevol Thakro et al.
Rajib Kumbhakar et al.
Integrated genome-wide and haplotype-based association analyses identified a key genomic locus governing plant growth habit (PGH) traits in chickpea. Identification of molecular markers governing plant growth habit (PGH) traits that enable ...
Modern Japanese rice cultivars often carry a nonautonomous retrotransposon-insertion mutation at the pathogenesis-related 1b protein gene locus causing reduced resistance to Pyricularia oryzae [0.03%]
日本现代水稻栽培品种在病原相关蛋白1b基因位点常携带非自主逆转录转座子插入突变，导致对稻瘟菌的抗性下降
Taketo Ishihara,Kotaro Abe,Miyako Kato et al.
Taketo Ishihara et al.
In Japan, rice cultivars with high eating quality such as Koshihikari are often highly susceptible to the fungus Pyricularia oryzae, which causes rice blast, the most serious disease of rice; however, little is known about the genetic facto...
Ey-1 encodes a DEDDh exonuclease in eggplant (Solanum melongena), providing a novel pathway for begomovirus resistance [0.03%]
Ey-1编码一种DEDDH类核酸外切酶，赋予茄子对 begomovirus的抗性提供新的途径
Nadya Syafira Pohan,Kyohei Kikkawa,Natsuki Hata et al.
Nadya Syafira Pohan et al.
The whitefly-transmitted begomovirus can devastate Solanaceae crops worldwide. Despite a strong demand for the genetic introgression of begomovirus resistance, only the begomovirus resistance gene in tomatoes and peppers has been cloned. He...