GWAS SVatalog: a visualization tool to aid fine-mapping of GWAS loci with structural variations [0.03%]
GWAS SVatalog：一个有助于具有结构变异的基因组关联位点精细定位的可视化工具
Shalvi Chirmade,Zhuozhi Wang,Scott Mastromatteo et al.
Shalvi Chirmade et al.
Genome-wide association studies (GWAS) have been successful in identifying single nucleotide polymorphisms (SNPs) associated with phenotypic traits. However, SNPs form an incomplete set of variation across the genome and since a large perce...
Parallel clines of chromosomal inversion frequencies in seaweed flies are associated with thermal variation [0.03%]
海藻蝇染色体倒位频率的平行分布与温度变化相关
Léa A Nicolas,Emma L Berdan,Maren Wellenreuther et al.
Léa A Nicolas et al.
Chromosomal inversion supergenes, which form blocks of linked genes, are increasingly recognized for their role in maintaining intra-specific diversity. They are predicted to be relevant genetic architectures for local adaptation in the fac...
Patterns of genetic diversity and structure in Pressodonta viridis, Slippershell Mussel, in streams of the U.S. Midwest [0.03%]
美国中西部水域中国家珍稀贝类Pressodonta viridis的遗传多样性及结构格局分析
Gabrielle E Sanfilippo,Kentaro Inoue,David T Zanatta
Gabrielle E Sanfilippo
Pressodonta viridis (Bivalvia: Unionida) is a species of freshwater mussel considered rare and imperiled in 14 U.S. states and Ontario, Canada. Limited population-level genetic information is available for P. viridis despite the species' im...
Mitigating assembly and switch errors in phased genomes of polar fishes reveals haplotype diversity in copy number of antifreeze protein genes [0.03%]
极地鱼类分型基因组的组装和开关误差缓解揭示了抗冻蛋白基因拷贝数的单体型多样性
Owen W Moosman,Joanna L Kelley,Samuel N Bogan
Owen W Moosman
Phased genomes and pangenomes are enhancing our understanding of genetic variation. Accurate phasing and assembly in repetitive regions of the genome remain challenging, however. Addressing this obstacle is crucial for studying structural g...
Evidence of long-term purging of mutation burden in killer whale Orcinus orca genomes [0.03%]
杀伤鲸(Orcinusorca)基因组中长期清除突变负担的证据
Andrew D Foote,M Thomas P Gilbert,Shyam Gopalakrishnan et al.
Andrew D Foote et al.
Genomes of high latitude killer whales (Orcinus orca) harbour signatures of post-glacial founding and expansion. Here, we investigate whether reduced efficacy of selection increased the predicted mutation burden in founder populations with ...
Comparative analysis of gene family evolution demonstrates expansion of digestive, immunity and olfactory functions in the black soldier fly (Hermetia illucens) lineage [0.03%]
基因家族进化比较分析显示黑兵蝇（Hermetia illucens）谱系消化、免疫和嗅觉功能的扩展
Wenjun Zhou,Daniele Kunz,Chris D Jiggins
Wenjun Zhou
Structural variants such as chromosomal rearrangements and gene duplications can play an important role in the adaptation and diversification of organisms. Here, we used comparative genomics to study the functional implications of structura...
Last Glacial and Holocene dynamics override post-colonial disturbance in shaping genetic diversity of a heavily exploited palaeoendemic conifer, Lagarostrobos franklinii [0.03%]
末次冰盛世和全新世以来的种群动态而非殖民后的干扰塑造了近代遭受严重采伐的特有冷杉拉格罗斯特罗波斯 franklinii 的遗传多样性
James R P Worth,James R Marthick,Yoshihisa Suyama et al.
James R P Worth et al.
The impact of past anthropogenic disturbance on the amount and distribution of genetic diversity is a key factor in determining the resilience of tree species to environmental change. This is particularly the case for narrowly distributed s...
Chromatin state dynamics of autosomes and the B chromosome during spermatogenesis in Pseudococcus viburni [0.03%]
Pseudococcus viburni有丝分裂过程中常染色体和B染色体的染色质状态动态变化
Marion Herbette,Laura Ross
Marion Herbette
The mealybug Pseudococcus viburni is a plant-feeding insect with a non-Mendelian genetic system known as paternal genome elimination (PGE). In PGE, males eliminate their paternally inherited chromosomes during meiosis, transmitting only the...
Genetic structure and historical gene flow in Araucaria angustifolia populations across two Brazilian regions [0.03%]
两个巴西地区伞松种群的遗传结构及历史上的基因流动
Bruno Marchetti de Souza,João Ricardo Bachega Feijó Rosa,Evandro Vagner Tambarussi et al.
Bruno Marchetti de Souza et al.
Araucaria angustifolia (araucaria) is a conifer tree of high ecological and social values in the Brazilian subtropical region. However, the species is threatened with extinction. We examined the genetic variability and gene flow between pop...
Investigating the effects of chimerism on the inference of selection: quantifying genomic targets of purifying, positive, and balancing selection in common marmosets (Callithrix jacchus) [0.03%]
嵌合体对选择推断的影响研究：量化三趾树猴（Callithrix jacchus）纯化、正向及平衡选择的基因组目标
Vivak Soni,Cyril J Versoza,Susanne P Pfeifer et al.
Vivak Soni et al.
The common marmoset (Callithrix jacchus) is of considerable biomedical importance, yet there remains a need to characterize the evolutionary forces shaping empirically observed patterns of genomic variation in the species. However, two unco...