Massive inter-species introgression overwhelms phylogenomic relationships among jaguar, lion, and leopard [0.03%]
美洲豹，狮子和豹之间的大量种间渐渗超过系统发育基因组关系
Sarah H D Santos,Henrique V Figueiró,Tomas Flouri et al.
Sarah H D Santos et al.
Phylogenomic analyses of closely related species allow important glimpses into their evolutionary history. Although recent studies have demonstrated that interspecies hybridization has occurred in several groups, incorporating this process ...
Correction to: Phylogenomic Discordance is Driven by Wide-Spread Introgression and Incomplete Lineage Sorting During Rapid Species Diversification Within Rattlesnakes (Viperidae: Crotalus and Sistrurus) [0.03%]
修正：系统发育基因组不一致由响尾蛇（脊蛇科，Crotalus和Sistrurus）快速物种多样化过程中广泛存在的种间渐渗杂交和谱系不完全排序引起
Published Erratum
Systematic biology. 2025 Mar 13:syaf008. DOI:10.1093/sysbio/syaf008 2025
Global Diversity Patterns are Explained by Diversification Rates and Dispersal at Ancient, not Shallow, Timescales [0.03%]
全球多样性图谱由远古而非最近的分化率和迁入解释
Patrick R Stephens,Maxwell J Farrell,T Jonathan Davies et al.
Patrick R Stephens et al.
Explaining global species richness patterns is a major goal of evolution, ecology, and biogeography. These richness patterns are often attributed to spatial variation in diversification rates (speciation minus extinction). Surprisingly, pro...
Erwan Delrieu-Trottin,Selim Ben Chehida,Tedjo Sukmono et al.
Erwan Delrieu-Trottin et al.
Tropical insular systems have long attracted biologists, stimulating some important controversies in ecology and evolution. Eustatic fluctuations during the Pleistocene have been invoked to explain species dispersal and proliferation in the...
Phylogenomics of marine angelfishes: diagnosing sources of systematic discordance for an iconic reef fish family (F: Pomacanthidae) [0.03%]
海洋天使鱼的系统基因组学：识别一个著名珊瑚礁鱼类家庭(F: Pomacanthidae) 系统不一致性的来源
Lauriane M Baraf,Julia Y Hung,Peter F Cowman
Lauriane M Baraf
Genome-scale datasets are resolving challenging nodes across the tree of life. These datasets however, characterized by inherent heterogeneity, often push traditional phylogenetic reconstruction methods to their limits. By integrating multi...
Improved robustness to gene tree incompleteness, estimation errors, and systematic homology errors with weighted TREE-QMC [0.03%]
改进的加权TREE-QMC对基因树不完整，估计误差和系统同源性误差的鲁棒性提升
Yunheng Han,Erin K Molloy
Yunheng Han
methods are widely used to reconstruct species trees from gene tres while accommodating discordance from incomplete lineage sorting; however, it is increasingly recognized that their accuracy can be negatively impacted by incomplete and/or ...
Recent, Intricate Speciation in Amazonia Uncovered by a Multilayered Genomic Analysis of Tree Squirrels [0.03%]
亚马逊地区树木松鼠多层基因组分析揭示近期复杂的物种形成过程
Edson F Abreu,Joyce R Prado,Jesús E Maldonado et al.
Edson F Abreu et al.
Accurate estimates of species diversity are essential for all biodiversity research. Delimiting species and understanding the underlying processes of speciation are also central components of systematic biology that frame our comprehension ...
C Tomomi Parins-Fukuchi,James G Saulsbury
C Tomomi Parins-Fukuchi
Paleobiologists have long sought to explain how alternative modes of speciation, including budding and bifurcating cladogenesis, shape patterns of evolution. Methods introduced over the past decade have paved the way for a renewed enthusias...
Global Patterns of Taxonomic Uncertainty and its Impacts on Biodiversity Research [0.03%]
分类学不确定性全球模式及其对生物多样性研究的影响
Jhonny J M Guedes,Mario R Moura,Lucas Jardim et al.
Jhonny J M Guedes et al.
Over two million species have been named so far, but many will be invalidated due to redundant descriptions. Undetected invalid species (i.e., synonyms) can impair inferences we make in biodiversity research and hamper the implementation of...
UnFATE: A Comprehensive Probe Set and Bioinformatics Pipeline for Phylogeny Reconstruction and Multilocus Barcoding of Filamentous Ascomycetes (Ascomycota, Pezizomycotina) [0.03%]
UnFATE:用于子囊菌（Sacromycota，Pezizomycotina）系统发育重建和多位点条形码的全面探针组和生物信息学流程
Claudio G Ametrano,Jacob Jensen,H Thorsten Lumbsch et al.
Claudio G Ametrano et al.
The subphylum Pezizomycotina (filamentous ascomycetes) is the largest clade within Ascomycota. Despite the importance of this group of fungi, our understanding of their evolution is still limited due to insufficient taxon sampling. Although...