Disentangling Incomplete Lineage Sorting and Introgression to Refine Species-Tree Estimates for Lake Tanganyika Cichlid Fishes [0.03%]
揭开不完全谱系分选和基因流以细化坦噶尼喀湖丽鱼科鱼类的物种树估计结果
Britta S Meyer,Michael Matschiner,Walter Salzburger
Britta S Meyer
Adaptive radiation is thought to be responsible for the evolution of a great portion of the past and present diversity of life. Instances of adaptive radiation, characterized by the rapid emergence of an array of species as a consequence to...
SpeciesGeoCoder: Fast Categorization of Species Occurrences for Analyses of Biodiversity, Biogeography, Ecology, and Evolution [0.03%]
物种地理编码器：快速分类生物多样性、生物地理学、生态学和进化研究中的物种分布点数据
Mats Töpel,Alexander Zizka,Maria Fernanda Calió et al.
Mats Töpel et al.
Understanding the patterns and processes underlying the uneven distribution of biodiversity across space constitutes a major scientific challenge in systematic biology and biogeography, which largely relies on effectively mapping and making...
Maximum Likelihood Implementation of an Isolation-with-Migration Model for Three Species [0.03%]
包含迁移的三物种隔离模型的最大似然实现方法
Daniel A Dalquen,Tianqi Zhu,Ziheng Yang
Daniel A Dalquen
We develop a maximum likelihood (ML) method for estimating migration rates between species using genomic sequence data. A species tree is used to accommodate the phylogenetic relationships among three species, allowing for migration between...
Published Erratum
Systematic biology. 2016 Sep;65(5):945. DOI:10.1093/sysbio/syw046 2016
Published Erratum
Systematic biology. 2016 Sep;65(5):944. DOI:10.1093/sysbio/syw045 2016
The Identification of the Closest Living Relative(s) of Tetrapods: Phylogenomic Lessons for Resolving Short Ancient Internodes [0.03%]
识别四足动物最近的现存亲属：用基因组系统发生树解决短而古老的分支问题给我们的启示
Iker Irisarri,Axel Meyer
Iker Irisarri
Identifying the closest living relative(s) of tetrapods is an important, yet still contested question in vertebrate phylogenetics. Three hypotheses are possible and ruling out alternatives has proven difficult even with large molecular data...
Published Erratum
Systematic biology. 2016 Nov;65(6):1123. DOI:10.1093/sysbio/syw061 2016
Understanding Past Population Dynamics: Bayesian Coalescent-Based Modeling with Covariates [0.03%]
基于贝叶斯基因共祖模型和协变量的往期人口动态研究
Mandev S Gill,Philippe Lemey,Shannon N Bennett et al.
Mandev S Gill et al.
Effective population size characterizes the genetic variability in a population and is a parameter of paramount importance in population genetics and evolutionary biology. Kingman's coalescent process enables inference of past population dy...
Likelihood-Based Parameter Estimation for High-Dimensional Phylogenetic Comparative Models: Overcoming the Limitations of "Distance-Based" Methods [0.03%]
高维谱系比较模型的基于似然参数估计：克服“基于距离的方法”的局限性
Eric W Goolsby
Eric W Goolsby
Recently, a suite of distance-based multivariate phylogenetic comparative methods has been proposed for studying the evolution of high-dimensional traits, such as morphometric coordinates, gene expression data, and function-valued traits. T...
Spatiotemporal Diversification of the True Frogs (Genus Rana): A Historical Framework for a Widely Studied Group of Model Organisms [0.03%]
真实的青蛙（真蛙属Rana）的时空分化：一个广受研究的模式生物类群的历史框架
Zhi-Yong Yuan,Wei-Wei Zhou,Xin Chen et al.
Zhi-Yong Yuan et al.
True frogs of the genus Rana are widely used as model organisms in studies of development, genetics, physiology, ecology, behavior, and evolution. Comparative studies among the more than 100 species of Rana rely on an understanding of the e...