3 Biotech. 2025 Jul;15(7):210. doi: 10.1007/s13205-025-04375-6 Q22.92025

Genome-wide identification of the apple NLP (NIN-like proteins) family and their potential role under abiotic stress

苹果NLP（NIN-like蛋白）家族的全基因组鉴定及其在非生物胁迫下的潜在作用翻译改进

Junrong Li¹, Qiandong Hou¹, Xiangmei Nie¹, Chunqiong Shang¹, Qinglong Dong², Qian Wang¹

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作者单位

¹ Key Laboratory of Plant Resource Conservation and Germplasm Innovation in Mountainous Region (Ministry of Education), College of Life Sciences/Institute of Agro-Bioengineering, Guizhou University, Guiyang, 550025 Guizhou China.

² College of Forestry, Hebei Agricultural University, Baoding, 071001 Hebei China.

DOI: 10.1007/s13205-025-04375-6 PMID: 40521217

摘要中英对照阅读

NIN-like proteins (NLPs), unique to plants, are conserved transcription factors that significantly influence nitrate levels. However, a comprehensive analysis of the apple NLP gene family remains lacking. In this study, five NLP members were identified from the apple (Malus domestica) genome, and structural analysis revealed that each member contains RWP-RK and PB1 domains, which were classified into three branches by phylogenetic analysis. Additionally, c... ...点击完成人机验证后继续浏览

植物特有的NIN-like蛋白（NLPs）是一类保守的转录因子，对硝酸盐水平有显著影响。然而，关于苹果NLP基因家族的全面分析仍然缺乏。本研究从苹果（Malus domestica）基因组中鉴定出五个NLP成员，并通过结构分析发现每个成员都含有RWP-RK和PB1域，这些成员在系统发育分析中被分类为三个分支。此外，在MdNLP启动子中发现了与非生物胁迫（如植物激素和低温响应元件）以及氮（N）响应元件相关的顺式作用元件。
在不同组织中的RNA测序数据显示，MdNLP在叶片、花和果实中有广泛的表达。还研究了不同非生物胁迫下MdNLP的表达模式。MdNLP在接受吲哚-3-乙酸（IAA）和赤霉素（GA₃）处理后上调，其中MdNLP2和MdNLP5在GA₃处理后的上调最为显著。大多数MdNLP基因在低温胁迫下上调，但MdNLP3除外；而在盐胁迫下，则大多下调。在低氮胁迫下，MdNLP3和MdNLP4显著上调，表明它们可能作为改善苹果氮利用的候选基因。
因此，这些结果为更好地理解MdNLP家族在低氮胁迫响应以及苹果生长发育中的作用奠定了基础。

补充信息：在线版本包含可在10.1007/s13205-025-04375-6获得的补充材料。

关键词：非生物胁迫；苹果；低氮胁迫；MdNLP；NIN-like蛋白。

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期刊名：3 biotech

缩写：3 BIOTECH

ISSN：2190-572X

e-ISSN：2190-5738

IF/分区：2.9/Q2

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Genome-wide identification of the apple NLP (NIN-like proteins) family and their potential role under abiotic stress

苹果NLP（NIN-like蛋白）家族的全基因组鉴定及其在非生物胁迫下的潜在作用翻译改进

Genome-wide identification and expression analysis of the CBF transcription factor family in Lolium perenne under abiotic stress

基于非生物胁迫鉴定和分析多年生黑麦草CBF转录因子家族的基因表达式

Genome-wide identification and analysis of ascorbate peroxidase (APX) gene family in hemp (Cannabis sativa L.) under various abiotic stresses

大麻(Cannabis sativa L.)在各种非生物胁迫下抗坏血酸过氧化物酶(APX)基因家族的全基因组鉴定和分析

Genome-wide identification and transcript profiles of walnut heat stress transcription factor involved in abiotic stress

基于转录组的核桃逆境响应型胁迫转录因子基因鉴定及表达分析

Genome-wide identification and abiotic stress-responsive pattern of heat shock transcription factor family in Triticum aestivum L

六倍体小麦热休克转录因子家族的基因组鉴定及逆境响应模式分析

Genome-wide identification and characterization of pectin methylesterase inhibitor gene family members related to abiotic stresses in watermelon

与非生物胁迫相关的全基因组鉴别和表征甜瓜半乳糖醛酸聚糖甲基酯酶抑制剂基因家族成员

Genome-Wide Identification of 14-3-3 gene family reveals their diverse responses to abiotic stress by interacting with StABI5 in Potato (Solanum tuberosum L.)

基于生物信息学和启动子分析鉴定出一个新的马铃薯14-3-3基因家族及其对非生物胁迫的响应机制

Genome-wide identification and expression analysis of the glutathione transferase gene family and its response to abiotic stress in rye (Secale cereale)

全基因组识别和表达分析节节麦谷胱甘肽转移酶基因家族及其对非生物胁迫的响应

Genome-Wide Identification and Expression Profiling of the SPL Transcription Factor Family in Response to Abiotic Stress in Centipedegrass

百喜草响应非生物胁迫的SPL转录因子家族的全基因组鉴定及表达谱分析

Genome-wide identification of the apple NLP (NIN-like proteins) family and their potential role under abiotic stress

苹果NLP（NIN-like蛋白）家族的全基因组鉴定及其在非生物胁迫下的潜在作用 翻译改进

Genome-wide identification and expression analysis of the CBF transcription factor family in Lolium perenne under abiotic stress

基于非生物胁迫鉴定和分析多年生黑麦草CBF转录因子家族的基因表达式

Genome-wide identification and analysis of ascorbate peroxidase (APX) gene family in hemp (Cannabis sativa L.) under various abiotic stresses

大麻(Cannabis sativa L.)在各种非生物胁迫下抗坏血酸过氧化物酶(APX)基因家族的全基因组鉴定和分析

Genome-wide identification and transcript profiles of walnut heat stress transcription factor involved in abiotic stress

基于转录组的核桃逆境响应型胁迫转录因子基因鉴定及表达分析

Genome-wide identification and abiotic stress-responsive pattern of heat shock transcription factor family in Triticum aestivum L

六倍体小麦热休克转录因子家族的基因组鉴定及逆境响应模式分析

Genome-wide identification and characterization of pectin methylesterase inhibitor gene family members related to abiotic stresses in watermelon

与非生物胁迫相关的全基因组鉴别和表征甜瓜半乳糖醛酸聚糖甲基酯酶抑制剂基因家族成员

Genome-Wide Identification of 14-3-3 gene family reveals their diverse responses to abiotic stress by interacting with StABI5 in Potato (Solanum tuberosum L.)

基于生物信息学和启动子分析鉴定出一个新的马铃薯14-3-3基因家族及其对非生物胁迫的响应机制

Genome-wide identification and expression analysis of the glutathione transferase gene family and its response to abiotic stress in rye (Secale cereale)

全基因组识别和表达分析节节麦谷胱甘肽转移酶基因家族及其对非生物胁迫的响应

Genome-Wide Identification and Expression Profiling of the SPL Transcription Factor Family in Response to Abiotic Stress in Centipedegrass

百喜草响应非生物胁迫的SPL转录因子家族的全基因组鉴定及表达谱分析

苹果NLP（NIN-like蛋白）家族的全基因组鉴定及其在非生物胁迫下的潜在作用翻译改进