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Journal of chemical information and modeling. 2024 Jun 24;64(12):4661-4672. doi: 10.1021/acs.jcim.4c00232 Q15.32025

Building Block-Centric Approach to DNA-Encoded Library Design

面向DNA编码库设计的构建模块中心法 翻译改进

Patrick R Fitzgerald  1, Anjali Dixit  2, Chris Zhang  3, David L Mobley  2  3, Brian M Paegel  2  3

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作者单位

  • 1 Skaggs Doctoral Program in the Chemical and Biological Sciences, Scripps Research, La Jolla, California 92037, United States.
  • 2 Department of Pharmaceutical Sciences, University of California, Irvine, California 92697, United States.
  • 3 Department of Chemistry, University of California, Irvine, California 92697, United States.
  • DOI: 10.1021/acs.jcim.4c00232 PMID: 38860710

    摘要 Ai翻译

    DNA-encoded library technology grants access to nearly infinite opportunities to explore the chemical structure space for drug discovery. Successful navigation depends on the design and synthesis of libraries with appropriate physicochemical properties (PCPs) and structural diversity while aligning with practical considerations. To this end, we analyze combinatorial library design constraints including the number of chemistry cycles, bond construction strategies, and building block (BB) class selection in pursuit of ideal library designs. We compare two-cycle library designs (amino acid + carboxylic acid, primary amine + carboxylic acid) in the context of PCPs and chemical space coverage, given different BB selection strategies and constraints. We find that broad availability of amines and acids is essential for enabling the widest exploration of chemical space. Surprisingly, cost is not a driving factor, and virtually, the same chemical space can be explored with "budget" BBs.

    Keywords:dna-encoded library

    Copyright © Journal of chemical information and modeling. 中文内容为AI机器翻译,仅供参考!

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    期刊名:Journal of chemical information and modeling

    缩写:J CHEM INF MODEL

    ISSN:1549-9596

    e-ISSN:1549-960X

    IF/分区:5.3/Q1

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